Add links to process containers

AlfredUg · Sep 10, 2023 · 62232ee · 62232ee
1 parent b2b1cc3
commit 62232ee
Showing 1 changed file with 19 additions and 0 deletions.
diff --git a/conf/containers.config b/conf/containers.config
@@ -0,0 +1,19 @@
+process {
+    withName:runfastQC {
+        container = 'quay.io/biocontainers/fastqc:0.11.8--1'
+    }
+    withName:runMultiQC {
+        container = 'quay.io/biocontainers/multiqc:1.7--py_4'
+    }
+    withName:runTrimGalore {
+        container = 'quay.io/biocontainers/trim-galore'
+    }  
+    withName:runHydra {
+        container = 'docker://alfredug/quasitools'
+    }
+    withName:runSierralocal {
+        container = 'docker://alfredug/sierralocal'
+    }
+    withName:renderReport {
+        container = 'docker://alfredug/rbase'
+}