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taXaminer v0.7.3

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@fdarthen fdarthen released this 07 Aug 07:36
· 1 commit to main since this release
42e1862

New features:

  • option for protein to gene ID mapping file
  • feature for re-grouping of taxonomic assignments for plot labels
  • filtering modul of gene/CDS/protein and contig sequences
  • support of UniRefXX databases
  • incorporation of non-coding genes
  • creation of taxSun output
  • adaptable coloring scheme
  • adaptable sensitivity for DIAMOND search
  • umap for dimensionality reduction

Updates:

  • progress bars
  • major runtime improvements

Fixes:

  • stability of reading GFF files
    • duplicate gene IDs
    • Parent feature = gene ID for all subfeatures
    • duplicate IDs in gene subfeatures
  • diamond installation with miniconda
  • gene neighbor assessment