MP2RAGE-utils

Usage

Setup all parameters and paths in the config.yml file
and then run
mp2rage_main('config.yml')

MP2RAGE functions

MP2RAGE Scripts from José Marques : https://github.com/JosePMarques/MP2RAGE-related-scripts

• Background noise removal by using a "robust"/regularized version of the combination of the two inversion time images.
• T1 map estimation using the MP2RAGE sequence
• T1 map correction using an additional B1 map (Sa2RAGE/TFL)

Nifti I/O functions

NIfTI tools from Jimmy Shen : https://nl.mathworks.com/matlabcentral/fileexchange/8797-tools-for-nifti-and-analyze-image

YAML functionality

ReadYAML from Lloyd Russell : https://github.com/llerussell/ReadYAML