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Graph functionality #1

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Commits on Nov 19, 2020

  1. add the suffix array function to Arkouda

    @zhihuidu
    zhihuidu committed Nov 19, 2020
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  2. add suffix array benchmark sa.py

    @zhihuidu
    zhihuidu committed Nov 19, 2020
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Commits on Nov 25, 2020

  1. add read file suffix array function and all libdivsufsort files

    @zhihuidu
    zhihuidu committed Nov 25, 2020
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Commits on Nov 26, 2020

  1. change name

    @zhihuidu
    zhihuidu committed Nov 26, 2020
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  2. add suffix_array Python test

    @zhihuidu
    zhihuidu committed Nov 26, 2020
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Commits on Dec 8, 2020

  1. add Chapel skew suffix array algorithm

    @zhihuidu
    zhihuidu committed Dec 8, 2020
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  2. add the lcp array method

    @zhihuidu
    zhihuidu committed Dec 8, 2020
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Commits on Dec 9, 2020

  1. confirm submit all changes

    @zhihuidu
    zhihuidu committed Dec 9, 2020
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Commits on Dec 14, 2020

  1. add thirdpary files

    @zhihuidu
    zhihuidu committed Dec 14, 2020
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  2. solve conflict

    @zhihuidu
    zhihuidu committed Dec 14, 2020
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  3. add thirdparty files

    @zhihuidu
    zhihuidu committed Dec 14, 2020
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  4. updated

    @dbader13
    dbader13 committed Dec 14, 2020
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  5. Update SACA.chpl comments 

    reworded and added some comments
    @alvaradoo
    alvaradoo committed Dec 14, 2020
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  6. Merge pull request #3 from alvaradoo/patch-1 

    Update SACA.chpl comments
    @zhihuidu
    zhihuidu committed Dec 14, 2020
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Commits on Dec 15, 2020

  1. remove tab, remove unused codes

    @zhihuidu
    zhihuidu committed Dec 15, 2020
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Commits on Dec 17, 2020

  1. change to relative directory

    @zhihuidu
    zhihuidu committed Dec 17, 2020
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Commits on Dec 20, 2020

  1. include sa.py into run_benchmarks.py

    @zhihuidu
    zhihuidu committed Dec 20, 2020
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  2. suffix_arry_file updated

    @zhihuidu
    zhihuidu committed Dec 20, 2020
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  3. remove tab in MultiTypeSymEntry.chpl

    @zhihuidu
    zhihuidu committed Dec 20, 2020
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  4. datatype in string.py

    @zhihuidu
    zhihuidu committed Dec 20, 2020
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  5. remove suffixarray_test.py

    @zhihuidu
    zhihuidu committed Dec 20, 2020
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  6. update third party config

    @zhihuidu
    zhihuidu committed Dec 20, 2020
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Commits on Dec 21, 2020

  1. follow suggestions from community

    @zhihuidu
    zhihuidu committed Dec 21, 2020
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Commits on Dec 22, 2020

  1. solve the conflict

    @zhihuidu
    zhihuidu committed Dec 22, 2020
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  2. update the SegSArray

    @zhihuidu
    zhihuidu committed Dec 22, 2020
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Commits on Dec 24, 2020

  1. remove unused import

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  2. align with strings function

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  3. correct a typo

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  4. type match

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  5. data type

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  6. bool or pdarray

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  7. remove binary op

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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  8. remove binary op

    @zhihuidu
    zhihuidu committed Dec 24, 2020
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Commits on Dec 26, 2020

  1. remove the bug causing wrong return string value

    @zhihuidu
    zhihuidu committed Dec 26, 2020
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  2. import SArrays class in pdarraysetops.py

    @zhihuidu
    zhihuidu committed Dec 26, 2020
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  3. add an empty correctness function

    @zhihuidu
    zhihuidu committed Dec 26, 2020
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  4. copy master gather.py

    @zhihuidu
    zhihuidu committed Dec 26, 2020
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  5. make sa.py check easy

    @zhihuidu
    zhihuidu committed Dec 26, 2020
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  6. check test/*.chpl

    @zhihuidu
    zhihuidu committed Dec 26, 2020
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Commits on Dec 27, 2020

  1. add corectness check in sa.py

    @zhihuidu
    zhihuidu committed Dec 27, 2020
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  2. change suffix array return as an int array

    @zhihuidu
    zhihuidu committed Dec 27, 2020
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Commits on Dec 28, 2020

  1. copy string_test.py

    @zhihuidu
    zhihuidu committed Dec 28, 2020
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Commits on Jan 4, 2021

  1. Fixed bug in UnitTestPeelStick

    @reuster986
    reuster986 committed Jan 4, 2021
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  2. update lcp related code

    @zhihuidu
    zhihuidu committed Jan 4, 2021
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  3. Merge pull request #4 from reuster986/master 

    Fixed bug in UnitTestPeelStick
    @zhihuidu
    zhihuidu committed Jan 4, 2021
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  4. remove the enhenced attribute in sym table

    @zhihuidu
    zhihuidu committed Jan 4, 2021
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Commits on Jan 5, 2021

  1. check the comments to remove docs CI check error

    @zhihuidu
    zhihuidu committed Jan 5, 2021
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  2. solve the sphinx error

    @zhihuidu
    zhihuidu committed Jan 5, 2021
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Commits on Jan 8, 2021

  1. add switch betwteen different SA algorithms

    @zhihuidu
    zhihuidu committed Jan 8, 2021
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  2. single locales for C code

    @zhihuidu
    zhihuidu committed Jan 8, 2021
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  3. resolve convlict

    @zhihuidu
    zhihuidu committed Jan 8, 2021
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Commits on Jan 11, 2021

  1. return the string for suffix_array_file

    @zhihuidu
    zhihuidu committed Jan 11, 2021
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  2. remove mypy CI check error

    @zhihuidu
    zhihuidu committed Jan 11, 2021
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  3. tuple data type

    @zhihuidu
    zhihuidu committed Jan 11, 2021
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Commits on Jan 20, 2021

  1. update the partial results in graph

    @zhihuidu
    zhihuidu committed Jan 20, 2021
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Commits on Jan 21, 2021

  1. update bool parameters

    @zhihuidu
    zhihuidu committed Jan 21, 2021
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  2. RAMT benchmark

    @zhihuidu
    zhihuidu committed Jan 21, 2021
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  3. remove print information

    @zhihuidu
    zhihuidu committed Jan 21, 2021
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  4. comment some graph functions

    @zhihuidu
    zhihuidu committed Jan 21, 2021
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  5. update graph class

    @zhihuidu
    zhihuidu committed Jan 21, 2021
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Commits on Jan 23, 2021

  1. vertex model, add start_i

    @zhihuidu
    zhihuidu committed Jan 23, 2021
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Commits on Jan 24, 2021

  1. implement bfs algorithm

    @zhihuidu
    zhihuidu committed Jan 24, 2021
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Commits on Jan 25, 2021

  1. add bfs.py, remove bugs

    @zhihuidu
    zhihuidu committed Jan 25, 2021
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  2. check comipling error

    @zhihuidu
    zhihuidu committed Jan 25, 2021
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  3. add graph read function and benchmark

    @zhihuidu
    zhihuidu committed Jan 25, 2021
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Commits on Jan 28, 2021

  1. bfs return one array

    @zhihuidu
    zhihuidu committed Jan 28, 2021
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  2. use for instead of forall

    @zhihuidu
    zhihuidu committed Jan 28, 2021
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Commits on Jan 31, 2021

  1. forall intention

    @zhihuidu
    zhihuidu committed Jan 31, 2021
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  2. add use set

    @zhihuidu
    zhihuidu committed Jan 31, 2021
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  3. change bfs.py parameters

    @zhihuidu
    zhihuidu committed Jan 31, 2021
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Commits on Feb 1, 2021

  1. add data filtering patterns

    @zhihuidu
    zhihuidu committed Feb 1, 2021
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  2. only fillInt

    @zhihuidu
    zhihuidu committed Feb 1, 2021
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Commits on Feb 3, 2021

  1. reorganize the rmat bfs code

    @zhihuidu
    zhihuidu committed Feb 3, 2021
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