Releases: BioMemPhys-FAU/domhmm
Releases · BioMemPhys-FAU/domhmm
1.1.0 PyPI Update
What's Changed
- Dependency Update by @yusuferentunc in #52
- Update pyproject.toml by @m-a-r-i-u-s in #54
- Pip Upgrade by @yusuferentunc in #55
- Figure Save Option by @yusuferentunc in #56
- Paper Updates by @yusuferentunc in #57
Full Changelog: 1.0.0...1.1.0
Contributors
m-a-r-i-u-s and yusuferentunc
Assets 2
1.0.0 First Release
DomHmm first release with respect to Milestone 1
What's Changed
- Pipeline fix by @yusuferentunc in #8
- DomHMM Implementation by @yusuferentunc in #13
- Sterol and Flip-Flop Logic Implementation by @yusuferentunc in #15
- Data fix by @yusuferentunc in #16
- Speed up Voronoi by @m-a-r-i-u-s in #17
- Unit Test Implementation by @yusuferentunc in #19
- Order Parameter Calculation Fix by @yusuferentunc in #20
- Sparse Weight Matrix by @yusuferentunc in #21
- Z Score Calculation by @yusuferentunc in #22
- Made leaflet selection rate a user-defined variable. by @m-a-r-i-u-s in #24
- Leaflet Wise Training for Asymmetric Simulations by @yusuferentunc in #23
- Added fix for Voronoi area calculation by @m-a-r-i-u-s in #26
- New leaflet selection interface by @m-a-r-i-u-s in #28
- Logging Implementation by @yusuferentunc in #29
- Add GMM and HMM Parameters by @yusuferentunc in #30
- Documentation Implementation by @yusuferentunc in #31
- Clustering Result Implementation by @yusuferentunc in #32
- Update base.py by @m-a-r-i-u-s in #33
- Fix error cause of lipid locating only in one leaflet by @yusuferentunc in #35
- Add clustering for both leaflets by @m-a-r-i-u-s in #37
- Introduced tqdm by @m-a-r-i-u-s in #38
- Reuse hmm by @m-a-r-i-u-s in #39
- Fix resid order by @yusuferentunc in #42
- Reuse HMM Tests and Documentation by @yusuferentunc in #43
- Fix residue indexing by @yusuferentunc in #44
- implement logic of transmembrane domain inclusion into the area per lipid calculation by @yusuferentunc in #46
- Update domhmm.py - Fix residue ordering by @m-a-r-i-u-s in #47
- Update Readthedocs configuration by @yusuferentunc in #48
- Documentation Updates on TMD Protein and Asymmetric Membrane by @yusuferentunc in #49
New Contributors
- @yusuferentunc made their first contribution in #8
- @m-a-r-i-u-s made their first contribution in #17
Full Changelog: https://github.com/BioMemPhys-FAU/domhmm/commits/v1.0.0
Contributors
m-a-r-i-u-s and yusuferentunc