Handle for edge case in DynamicBind having missing protein outputs #263
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| name: documentation | |
| on: [push, pull_request, workflow_dispatch] | |
| permissions: | |
| contents: write | |
| jobs: | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Setup miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-variant: Mambaforge | |
| python-version: ${{ matrix.python-version }} | |
| auto-update-conda: true | |
| use-mamba: true | |
| auto-activate-base: false | |
| activate-environment: "PoseBench-Documentation" | |
| environment-file: docs/.docs.environment.yaml | |
| - name: Install dependencies | |
| run: | | |
| $CONDA/envs/PoseBench-Documentation/bin/pip install -e . | |
| - name: Sphinx build | |
| run: | | |
| rm -rf docs/build/ && $CONDA/envs/PoseBench-Documentation/bin/sphinx-build docs/source/ docs/build/ | |
| - name: Deploy to GitHub Pages | |
| uses: peaceiris/actions-gh-pages@v4 | |
| if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/main' }} | |
| with: | |
| publish_branch: gh-pages | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: docs/build/ | |
| force_orphan: true |