bump versions

Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "oarfish"
-version = "0.5.1"
+version = "0.6.0"
 edition = "2021"
 authors = [
   "Zahra Zare Jousheghani <zzare@umd.edu>",
@@ -28,20 +28,20 @@ categories = ["command-line-utilities", "science"]
 seqcol_rs = { git = "https://github.com/COMBINE-lab/seqcol_rs", branch = "dev", version = "0.1.0" }
 anyhow = "1.0.86"
 bio-types = { version = "1.0.4", features = ["serde"] }
-clap = { version = "4.5.13", features = ["derive"] }
+clap = { version = "4.5.16", features = ["derive"] }
 noodles-bam = "0.66.0"
 noodles-sam = "0.63.0"
 num-format = "0.4.4"
 tabled = "0.16.0"
 tracing = "0.1.40"
 tracing-subscriber = { version = "0.3.18", features = ["env-filter"] }
-typed-builder = "0.19.1"
+typed-builder = "0.20.0"
 rayon = "1.10"
 statrs = "0.17"
 csv = "1.3"
 serde = { version = "1", features = ["derive"] }
 itertools = "0.13.0"
-serde_json = "1.0.122"
+serde_json = "1.0.127"
 path-tools = "0.1.0"
 atomic_float = "1.0.0"
 rand = "0.8.5"