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@CanCOGeN-V

CanCOGeN-V

Genome Canada-led genomics initiative to address COVID-19 pandemic

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  1. covizu covizu Public

    Forked from PoonLab/covizu

    Rapid analysis and visualization of coronavirus genome variation

    Python 2

  2. covid-19-signal covid-19-signal Public

    Forked from jaleezyy/covid-19-signal

    Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.

    Python 1

  3. irida-plugin-viral-amplicon-consensus-variants irida-plugin-viral-amplicon-consensus-variants Public

    Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes

    Java

  4. ncov-tools ncov-tools Public

    Forked from jts/ncov-tools

    Small collection of tools for performing quality control on coronavirus sequencing data and genomes

    Python

  5. covseq_McGill covseq_McGill Public

    Forked from c3g/covseq_McGill

    McGill SARS-CoV2 Documentation

    Python

  6. nf-ncov-voc nf-ncov-voc Public

    Forked from cidgoh/nf-ncov-voc

    A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https:/…

    Python

Repositories

Showing 7 of 7 repositories
  • nf-ncov-voc Public Forked from cidgoh/nf-ncov-voc

    A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https://github.com/cidgoh/COVID-MVP) which can be used to visualize the mutation profiles and functional annotations.

    CanCOGeN-V/nf-ncov-voc’s past year of commit activity
    Python 0 MIT 5 0 0 Updated Apr 19, 2024
  • covid-19-signal Public Forked from jaleezyy/covid-19-signal

    Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.

    CanCOGeN-V/covid-19-signal’s past year of commit activity
    Python 1 MIT 25 0 0 Updated Jul 30, 2022
  • COVID-MVP Public Forked from cidgoh/VIRUS-MVP

    COVID-MVP is an interactive heatmap based visualization tool for SARS-CoV-2. It tracks mutations along with their functional impact and prevalence in Variants of Concern and Interest in near-real time. COVID-MVP is developed in collaboration with nf-ncov-voc https://github.com/cidgoh/nf-ncov-voc as back-end genomics workflow.

    CanCOGeN-V/COVID-MVP’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Apr 22, 2022
  • covseq_McGill Public Forked from c3g/covseq_McGill

    McGill SARS-CoV2 Documentation

    CanCOGeN-V/covseq_McGill’s past year of commit activity
    Python 0 1 0 0 Updated Nov 27, 2020
  • irida-plugin-viral-amplicon-consensus-variants Public

    Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes

    CanCOGeN-V/irida-plugin-viral-amplicon-consensus-variants’s past year of commit activity
    Java 0 Apache-2.0 0 1 0 Updated Nov 21, 2020
  • covizu Public Forked from PoonLab/covizu

    Rapid analysis and visualization of coronavirus genome variation

    CanCOGeN-V/covizu’s past year of commit activity
    Python 2 MIT 21 0 0 Updated Nov 12, 2020
  • ncov-tools Public Forked from jts/ncov-tools

    Small collection of tools for performing quality control on coronavirus sequencing data and genomes

    CanCOGeN-V/ncov-tools’s past year of commit activity
    Python 0 MIT 16 0 0 Updated Nov 12, 2020

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