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@CellProfiler

CellProfiler

Software for quantitative analysis of biological images

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  1. CellProfiler CellProfiler Public

    An open-source application for biological image analysis

    Python 893 375

  2. CellProfiler-plugins CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    Python 56 67

  3. CellProfiler-Analyst CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    Python 144 73

  4. tutorials tutorials Public

    CellProfiler tutorial pipelines and images

    Jupyter Notebook 81 87

  5. examples examples Public

    Example CellProfiler pipelines.

    Makefile 11 14

Repositories

Showing 10 of 30 repositories
  • tutorials Public

    CellProfiler tutorial pipelines and images

    CellProfiler/tutorials’s past year of commit activity
    Jupyter Notebook 81 BSD-3-Clause 87 3 0 Updated Sep 8, 2024
  • python-javabridge Public Forked from LeeKamentsky/python-javabridge

    Python wrapper for the Java Native Interface

    CellProfiler/python-javabridge’s past year of commit activity
    Python 21 62 10 4 Updated Sep 2, 2024
  • CellProfiler Public

    An open-source application for biological image analysis

    CellProfiler/CellProfiler’s past year of commit activity
    Python 893 375 295 15 Updated Aug 30, 2024
  • CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    CellProfiler/CellProfiler-plugins’s past year of commit activity
    Python 56 67 26 10 Updated Aug 28, 2024
  • core Public

    Core classes and components used by CellProfiler

    CellProfiler/core’s past year of commit activity
    Python 5 24 0 0 Updated Aug 26, 2024
  • CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    CellProfiler/CellProfiler-Analyst’s past year of commit activity
    Python 144 73 70 5 Updated Aug 15, 2024
  • centrosome Public

    An open source image processing library

    CellProfiler/centrosome’s past year of commit activity
    Python 17 35 29 1 Updated Jul 22, 2024
  • python-bioformats Public

    Read and write life sciences file formats

    CellProfiler/python-bioformats’s past year of commit activity
    Python 129 45 69 8 Updated Jan 17, 2024
  • CellProfiler-Explorer Public

    Web app for exploring CellProfiler data and combining with metadata

    CellProfiler/CellProfiler-Explorer’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Dec 20, 2023
  • distribution Public archive

    Everything needed to build CellProfiler for your favorite environment.

    CellProfiler/distribution’s past year of commit activity
    Python 4 6 13 0 Updated Oct 23, 2023
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