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Developer resources

Source code

The source code for the CellProfiler project is hosted in Git repositories administered by GitHub. The code can be checked out from these locations:

• CellProfiler 4 (Python 3.8): https://github.com/CellProfiler/CellProfiler/
• CellProfiler Analyst 3 (Python 2.7): https://github.com/CellProfiler/CellProfiler-Analyst/
• Deprecated versions, no longer actively developed:
• CellProfiler 1.0 (MATLAB, no longer under development): https://github.com/CellProfiler/CellProfiler1.0
• CellProfiler Analyst 1.0 (Java 1.6, no longer under development): https://svn.broadinstitute.org/CellProfiler/trunk/oldCPA/

Installation

• CellProfiler-Analyst Developer's version installation for PC
• CellProfiler-Analyst Developer's version installation for Mac
• Installation instructions for compiled versions of CellProfiler-Analyst are available at http://www.cellprofileranalyst.org.

Creating/retrieving executables

• Creating a standalone .exe on the PC
  
• Creating a standalone .app on the Mac
  
• Release versions (including past versions) are available at http://www.cellprofileranalyst.org.