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[WIP] python-upgrade cr responses part 1 #10656
[WIP] python-upgrade cr responses part 1 #10656
Commits on Mar 18, 2024
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Merge branch 'feature/dep-group-formatting' into feature/python-upgrade
[ENG-5366] Closes CenterForOpenScience#10559
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Commits on Mar 20, 2024
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Merge branch 'feature/dep-group-django' into feature/python-upgrade
[ENG-5330] Closes CenterForOpenScience#10558
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Merge branch 'feature/dep-group-dev' into feature/python-upgrade
[ENG-5336] Closes CenterForOpenScience#10566
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update dep versions for transitions, pillow, geoip2
- bump version for the transitions module; - add new modules: pillow, geoip2;
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specify str encoding in nameparser
- added a new parameter to specify the encoding of strings in constants for nameparser module;
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Commits on Mar 25, 2024
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Merge branch 'feature/dep-group-catchall' into feature/python-upgrade
ENG-5340 Closes CenterForOpenScience#10567
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Merge branch 'feature/fix-flask-context' into feature/python-upgrade
[ENG-5456] Closes CenterForOpenScience#10573
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Commits on Mar 26, 2024
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Merge branch 'feature/misc-updates' into feature/python-upgrade
* update github deps to pull from COS repos
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Commits on Mar 28, 2024
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Merge branch 'feature/dep-group-url-encoding' into feature/python-upg…
…rade [ENG-5332] Closes CenterForOpenScience#10560
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Commits on Mar 31, 2024
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Merge remote-tracking branch 'cos/develop' into feature/python-upgrade
* Merge develop into feature/python-upgrade * Update module usage changes * Run pyupgrade over new code
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Merge branch 'feature/dep-group-purge' into feature/python-upgrade
[ENG-5364] Closes CenterForOpenScience#10574
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Commits on Apr 2, 2024
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- replace ssl_cert_reqs with tlsAllowInvalidCertificates - remove dep from reqs.txt; update in addons/wiki/reqs.txt
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- revert back to v6.x; es module version must match server version - small whitespace updates
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Merge branch 'feature/dep-group-services' into feature/python-upgrade
[ENG-5368] Closes CenterForOpenScience#10575
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Commits on Apr 3, 2024
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Merge branch 'feature/dep-group-celery' into feature/python-upgrade
[ENG-5329] Closes CenterForOpenScience#10576
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Commits on Apr 10, 2024
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fixed several tests, in cases where apis were changed or asserts not …
…properly migrated
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Commits on Apr 11, 2024
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Merge branch 'feature/dep-group-tests' into feature/python-upgrade
[ENG-5327] Closes CenterForOpenScience#10578
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- update the README-docker-compose.md
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Commits on Apr 15, 2024
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Commits on Apr 16, 2024
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add back pymongo dep to requirements.txt
- I (@felliott) removed this from an earlier PR b/c I didn't realize that pymongo provides the bson module we use in the OSF. Mea culpa.
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Merge branch 'feature/local-pg15' into feature/python-upgrade
[ENG-5488] Closes CenterForOpenScience#10580
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Commits on Apr 17, 2024
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fixed more tests, added test report to CI, to ramp up development, fi…
…xed docker-compose invoke usage, fixed migrations
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fixed materialized bug, increased annotations limit and removed passi…
…ng tests from report
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more error fixes, lowered transitions to 0.8.11 due to breaking api c…
…hange in generated atrributes
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fixed url encodeing test failures, added TODO comments to each case s…
…o as to check with QA afterwards
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Merge branch 'feature/bugfix-party' into feature/python-upgrade
This branch contains rebased & cherry-picked fixes from seven different PRs / tickets. [ENG-5480] - replace webtest plus with FlaskClient Closes CenterForOpenScience#10583 commits 1e63cda..e3443f1 [ENG-5530] - fix sendgrid failures Closes CenterForOpenScience#10585 commit f9ba569 [ENG-5517] - fix url encoding test issues Closes CenterForOpenScience#10589 commits fd06b14..cc051c9 [ENG-5520] - fix JsonSchema issues Closes CenterForOpenScience#10590 commits 1b2b084..ec51327 [ENG-5523] - Fix embargo termination failures Closes CenterForOpenScience#10593 commit 41e685c [ENG-5490] - Fix github mock data Closes CenterForOpenScience#10586 commits 7db5e0f..1b652d5 [ENG-5519] - 401 instead of CAS redirect Closes CenterForOpenScience#10592 commits 30a3623..736ad49
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Merge branch 'feature/fix-middleware' into feature/python-upgrade
[ENG-5524] Closes CenterForOpenScience#10594
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Commits on Apr 18, 2024
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Merge branch 'feature/fix-sendgrid' into feature/python-upgrade
Actually fix [ENG-5530] and close CenterForOpenScience#10585. I (@felliott) thought this commit was included in another branch I merged and left it out. Mea culpa.
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Merge branch 'feature/rebase-repairs' into feature/python-upgrade
[ENG-5522] Closes CenterForOpenScience#10597
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Commits on Apr 21, 2024
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- fix status_code error for test_external_login_confirm_email_get_wit…
…hout_destination test;
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- fix error for test_provider_down test;
- fix errors with ExternalProviderMeta(type), ExternalProviderMeta;
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Commits on Apr 22, 2024
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Merge branch 'feature/fix-auth' into feature/python-upgrade
[ENG-5525] Closes CenterForOpenScience#10595
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Commits on May 1, 2024
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Merge remote-tracking branch 'cos/develop' into feature/python-upgrade
* Resolve some conflicts and run pyupgrade --py311-plus over new code
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resolved celery issue by skipping tests
* synchronous retries don't work on recent celery, so skip 'em!
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Merge branch 'feature/skip-share-interactions' into feature/python-up…
…grade [ENG-5526] Closes CenterForOpenScience#10599
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Commits on May 3, 2024
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explicitly close request context manager in test_session
* Close request context manager in teardown. Leaving it open was causing some of subsequent tests to fail * factor out some repeated code in github actions
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Merge branch 'feature/teardown-testsession' into feature/python-upgrade
[ENG-5521] Closes CenterForOpenScience#10602
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fixed testSearchViews queries for FlaskClient
* Some confusingly-named query parameters were incorrectly renamed when converting from webtest-plus to FlaskClient. Fix the call invocations to pass the right query param names. * Skip test if not running under CI. This test fails when run locally, for unknown reasons.
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Merge branch 'feature/fix-testsearchviews' into feature/python-upgrade
[ENG-5527] Closes CenterForOpenScience#10603
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Commits on May 6, 2024
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revert
datetime.UTC
back to pre-3.11 form* The `datetime.UTC` alias for `datetime.timezone.utc` was added in python v3.11. This project is currently targeting python v3.10.
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declare test markers in pytest.ini to silence warnings
* Custom markers used but not declared in pytest.ini will throw a warning during testing. This warning makes it sound like the marker is being ignored, but it's not. At the same time, incorrectly-named markers ARE ignored. Not intuitive, but makes sense eventually. The warning looks like: > PytestUnknownMarkWarning: Unknown pytest.mark.enable_enqueue_task > - is this a typo? You can register custom marks to avoid this > warning
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fix incorrectly-named pytest marker
* Many, many years ago[1] some new test speedups were added. One use of the marker was accidentally typoed as "enable_enqueue" instead of "enable_enqueue_task". Fix that. [1] CenterForOpenScience@0acc5c5ec
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replace yield_fixture with fixture to silence warnings
* Quiet the following test warning: > PytestDeprecationWarning: @pytest.yield_fixture is deprecated. > Use @pytest.fixture instead; they are the same.
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remove marker that is actually a fixture
* `django_assert_num_queries` is a fixture provided by pytest-django, not a marker. > PytestUnknownMarkWarning: Unknown > pytest.mark.django_assert_num_queries - is this a typo?
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silence pytest warning; return True will be an error
* Some tests were returning True to skip a parametrized run. Change that to `assert True` + `return` to avoid the following warning: > PytestReturnNotNoneWarning: Expected None, but <foo-test> > returned True, which will be an error in a future version of > pytest. Did you mean to use `assert` instead of `return`?
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silence warnings for osf app config
* Silence test warnings for osf apps config. The warnings take the form of: > "RemovedInDjango41Warning: 'addons.osfstorage' defines > default_app_config = > 'addons.osfstorage.apps.OSFStorageAddonAppConfig'. However, > Django's automatic detection did not find this configuration. The fix is to remove the `default_app_config` declaration from the app's __init__.py and to add `default = True` to the app config class.
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silence warnings for addon app configs
* Silence test warnings for addons apps configs. The warnings take the form of: > "RemovedInDjango41Warning: 'addons.osfstorage' defines > default_app_config = > 'addons.osfstorage.apps.OSFStorageAddonAppConfig'. However, > Django's automatic detection did not find this configuration. The fix is to remove the `default_app_config` declaration from the app's __init__.py and to add `default = True` to the app config class.
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replace ugettext_lazy with gettext_lazy to silence dep warnings
* Replace deprecated method: > RemovedInDjango40Warning: > django.utils.translation.ugettext_lazy() is deprecated in favor > of django.utils.translation.gettext_lazy()
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replace django urlquote with urllib quote to silence warnings
* Replace the following deprecated function: > "RemovedInDjango40Warning: django.utils.http.urlquote() is > deprecated in favor of urllib.parse.quote()."
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silence test warnings for non-test classes called 'Test*'
* We have some non-test classes named TestFoo. Add `__test__ = False` to these to keep them from being detected as tests. Warning: > PytestCollectionWarning: cannot collect test class 'TestFileNode' > because it has a __init__ constructor
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Merge branch 'feature/pyup-misc-fixes' into feature/python-upgrade
[ENG-5571] Closes CenterForOpenScience#10605
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Merge branch 'feature/github-gitlab-fixes' into feature/python-upgrade
[ENG-5546] Closes CenterForOpenScience#10606
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Merge branch 'fix/ENG-5531' into feature/python-upgrade
[ENG-5531] Closes CenterForOpenScience#10607
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Merge branch 'fix/ENG-5514' into feature/python-upgrade
[ENG-5514] Closes: CenterForOpenScience#10609
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removed test reports from PR, because they do not work when PRs are s…
…ubmitted from forks
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- fix errors for test_external_login_confirm_email_get_duped_id and t…
…est_external_login_confirm_email_get_duping_id tests;
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- fix errors for test_download_file_with_token and test_download_file…
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Merge branch 'feature/ENG-5553' into feature/python-upgrade
[ENG-5553] [ENG-5589] Closes CenterForOpenScience#10600
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- added follow_redirects=True as it helped return status code 200 instead of 301;
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Merge branch 'feature/ENG-5588' into feature/python-upgrade
[ENG-5588] Closes CenterForOpenScience#10615
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Merge pull request CenterForOpenScience#10618 from opaduchak/feature/…
…develop-updates [ENG-5617] Phase 3: Check new `develop` changes, fix conflicts and unit tests.
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- add space according to pep8; - rewrote the is_truthy and is_falsy functions;
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fixed mongodb for live edit, fixed using called-with which was remove…
…d in python 3.12
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removed leftover comments, enforced python compile success, added pac…
…kaging as requirement as it is missing in original requirements
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Merge branch 'feature/fix-py3.12-compile' into feature/python-upgrade
[ENG-5748] Closes CenterForOpenScience#10633
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Merge branch 'feature/fix-archiver-tests' into feature/python-upgrade
[ENG-5739] Closes CenterForOpenScience#10634 [ENG-5752] Closes CenterForOpenScience#10638
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fixed test_GET_approve_with_valid_token_redirects: for token_action c…
…all, fixed redirect link in test, for view_project call fixed it not to expect redirect nbeing called
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Merge branch 'feature/fix-token-redirects' into feature/python-upgrade
[ENG-5746] Closes CenterForOpenScience#10637
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Merge branch 'feature/s3-setup-fix' into feature/python-upgrade
[ENG-5780] Closes CenterForOpenScience#10639
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Merge branch 'feature/box-client-fix' into feature/python-upgrade
[ENG-5796] Closes CenterForOpenScience#10640
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Merge remote-tracking branch 'cos/develop' into feature/python-upgrade
* Include pyupgrade changes for py3.12
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switch to poetry for dep management
* made poetry resolve dependencies * fixed broken mendeley and dataverse-client-python dependencies to resolve alongside osf deps * added poetry to Dockerfile and CI * converted Dockerfile to multi-stage build in order to reduce image size
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Merge branch 'feature/poetry' into feature/python-upgrade
[ENG-5686] Closes CenterForOpenScience#10631
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Merge branch 'feature/fix-metrics' into feature/python-upgrade
[ENG-5772] Closes CenterForOpenScience#10651
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Merge remote-tracking branch 'cos/develop' into feature/cr-responses-…
…part-1 Merge changes from develop + pyupgrades
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