Update manifests

CliMA · Oct 1, 2023 · 0f8d1df · 0f8d1df
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Showing 3 changed files with 63 additions and 46 deletions.
diff --git a/docs/Manifest.toml b/docs/Manifest.toml
@@ -2,7 +2,7 @@
 
 julia_version = "1.9.3"
 manifest_format = "2.0"
-project_hash = "7fc686bc0a71a5f83e48b1285d03c4910b039279"
+project_hash = "0ec43c631f23df4ba1817c10e57a9aadcc74d6ad"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003"
@@ -419,9 +419,9 @@ version = "0.1.0+0"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dc50f5ef15406701057895deda051f82e53d5773"
+git-tree-sha1 = "22ab786efaef7b9ccb66a272d7cc2471bea76ba9"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.130.2"
+version = "6.130.4"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
@@ -504,16 +504,16 @@ uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
 version = "0.9.3"
 
 [[deps.Documenter]]
-deps = ["ANSIColoredPrinters", "Base64", "Dates", "DocStringExtensions", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"]
-git-tree-sha1 = "39fd748a73dce4c05a9655475e437170d8fb1b67"
+deps = ["ANSIColoredPrinters", "AbstractTrees", "Base64", "Dates", "DocStringExtensions", "Downloads", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "MarkdownAST", "Pkg", "PrecompileTools", "REPL", "RegistryInstances", "SHA", "Test", "Unicode"]
+git-tree-sha1 = "f667b805e90d643aeb1ca70189827f991a7cc115"
 uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
-version = "0.27.25"
+version = "1.1.0"
 
 [[deps.DocumenterCitations]]
-deps = ["Bibliography", "Documenter", "Markdown", "OrderedCollections", "Unicode"]
-git-tree-sha1 = "210f08c5b68e7c058aaa3ade24ff4fd7b6638789"
+deps = ["AbstractTrees", "Bibliography", "Documenter", "Markdown", "MarkdownAST", "OrderedCollections", "Unicode"]
+git-tree-sha1 = "0c5c141a66807796d580ef4fe592647132832f39"
 uuid = "daee34ce-89f3-4625-b898-19384cb65244"
-version = "1.1.0"
+version = "1.2.1"
 
 [[deps.Downloads]]
 deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
@@ -710,9 +710,9 @@ version = "1.9.0"
 
 [[deps.HDF5]]
 deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
-git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b"
+git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53"
 uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.17.0"
+version = "0.17.1"
 weakdeps = ["MPI"]
 
     [deps.HDF5.extensions]
@@ -910,6 +910,11 @@ git-tree-sha1 = "88b8f66b604da079a627b6fb2860d3704a6729a1"
 uuid = "10f19ff3-798f-405d-979b-55457f8fc047"
 version = "0.1.14"
 
+[[deps.LazilyInitializedFields]]
+git-tree-sha1 = "410fe4739a4b092f2ffe36fcb0dcc3ab12648ce1"
+uuid = "0e77f7df-68c5-4e49-93ce-4cd80f5598bf"
+version = "1.2.1"
+
 [[deps.Lazy]]
 deps = ["MacroTools"]
 git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f"
@@ -1088,6 +1093,12 @@ version = "0.4.2"
 deps = ["Base64"]
 uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 
+[[deps.MarkdownAST]]
+deps = ["AbstractTrees", "Markdown"]
+git-tree-sha1 = "e8513266815200c0c8f522d6d44ffb5e9b366ae4"
+uuid = "d0879d2d-cac2-40c8-9cee-1863dc0c7391"
+version = "0.1.1"
+
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
@@ -1170,10 +1181,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 version = "1.2.0"
 
 [[deps.NonlinearSolve]]
-deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "e10debcea868cd6e51249e8eeaf191c25f68a640"
+deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
+git-tree-sha1 = "847f6b564d74422440850a99912c314595be4023"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "1.10.1"
+version = "2.0.0"
 
 [[deps.OffsetArrays]]
 deps = ["Adapt"]
@@ -1216,9 +1227,9 @@ version = "1.6.2"
 
 [[deps.OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
-git-tree-sha1 = "ede6c2334cb30bc83a450b282c10d0ae82fc122e"
+git-tree-sha1 = "16d4feaf7e17ac63cb6bb742b0a4dfd50d1ef458"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.56.0"
+version = "6.57.0"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
@@ -1396,6 +1407,12 @@ git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b"
 uuid = "189a3867-3050-52da-a836-e630ba90ab69"
 version = "1.2.2"
 
+[[deps.RegistryInstances]]
+deps = ["LazilyInitializedFields", "Pkg", "TOML", "Tar"]
+git-tree-sha1 = "ffd19052caf598b8653b99404058fce14828be51"
+uuid = "2792f1a3-b283-48e8-9a74-f99dce5104f3"
+version = "0.1.0"
+
 [[deps.Requires]]
 deps = ["UUIDs"]
 git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7"
@@ -1443,9 +1460,9 @@ version = "0.6.39"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dd92cbd59870689fc460e821493ec5834c657b9a"
+git-tree-sha1 = "e7c518184850701c91df0e898241c07e03c7f367"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.0.6"
+version = "2.0.7"
 
     [deps.SciMLBase.extensions]
     ZygoteExt = "Zygote"
@@ -1822,9 +1839,9 @@ version = "0.5.5"
 
 [[deps.XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
-git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4"
+git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916"
 uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
-version = "2.10.4+0"
+version = "2.11.5+0"
 
 [[deps.YAML]]
 deps = ["Base64", "Dates", "Printf", "StringEncodings"]

diff --git a/examples/Manifest.toml b/examples/Manifest.toml
@@ -524,9 +524,9 @@ version = "0.1.0+0"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dc50f5ef15406701057895deda051f82e53d5773"
+git-tree-sha1 = "22ab786efaef7b9ccb66a272d7cc2471bea76ba9"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.130.2"
+version = "6.130.4"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
@@ -967,9 +967,9 @@ version = "1.0.2"
 
 [[deps.HDF5]]
 deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
-git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b"
+git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53"
 uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.17.0"
+version = "0.17.1"
 weakdeps = ["MPI"]
 
     [deps.HDF5.extensions]
@@ -1663,10 +1663,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 version = "1.2.0"
 
 [[deps.NonlinearSolve]]
-deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "e10debcea868cd6e51249e8eeaf191c25f68a640"
+deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
+git-tree-sha1 = "847f6b564d74422440850a99912c314595be4023"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "1.10.1"
+version = "2.0.0"
 
 [[deps.Observables]]
 git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93"
@@ -1756,9 +1756,9 @@ version = "1.6.2"
 
 [[deps.OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
-git-tree-sha1 = "ede6c2334cb30bc83a450b282c10d0ae82fc122e"
+git-tree-sha1 = "16d4feaf7e17ac63cb6bb742b0a4dfd50d1ef458"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.56.0"
+version = "6.57.0"
 
 [[deps.PCRE2_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -2152,9 +2152,9 @@ version = "0.6.39"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dd92cbd59870689fc460e821493ec5834c657b9a"
+git-tree-sha1 = "e7c518184850701c91df0e898241c07e03c7f367"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.0.6"
+version = "2.0.7"
 
     [deps.SciMLBase.extensions]
     ZygoteExt = "Zygote"
@@ -2675,9 +2675,9 @@ version = "1.18.0"
 
 [[deps.XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
-git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4"
+git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916"
 uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
-version = "2.10.4+0"
+version = "2.11.5+0"
 
 [[deps.XSLT_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]

diff --git a/perf/Manifest.toml b/perf/Manifest.toml
@@ -541,9 +541,9 @@ version = "0.1.0+0"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dc50f5ef15406701057895deda051f82e53d5773"
+git-tree-sha1 = "22ab786efaef7b9ccb66a272d7cc2471bea76ba9"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.130.2"
+version = "6.130.4"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
@@ -1014,9 +1014,9 @@ version = "1.0.2"
 
 [[deps.HDF5]]
 deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
-git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b"
+git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53"
 uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.17.0"
+version = "0.17.1"
 weakdeps = ["MPI"]
 
     [deps.HDF5.extensions]
@@ -1709,10 +1709,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 version = "1.2.0"
 
 [[deps.NonlinearSolve]]
-deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "e10debcea868cd6e51249e8eeaf191c25f68a640"
+deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
+git-tree-sha1 = "847f6b564d74422440850a99912c314595be4023"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "1.10.1"
+version = "2.0.0"
 
 [[deps.Observables]]
 git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93"
@@ -1802,9 +1802,9 @@ version = "1.6.2"
 
 [[deps.OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
-git-tree-sha1 = "ede6c2334cb30bc83a450b282c10d0ae82fc122e"
+git-tree-sha1 = "16d4feaf7e17ac63cb6bb742b0a4dfd50d1ef458"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.56.0"
+version = "6.57.0"
 
 [[deps.PCRE2_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -2222,9 +2222,9 @@ version = "0.6.39"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dd92cbd59870689fc460e821493ec5834c657b9a"
+git-tree-sha1 = "e7c518184850701c91df0e898241c07e03c7f367"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.0.6"
+version = "2.0.7"
 
     [deps.SciMLBase.extensions]
     ZygoteExt = "Zygote"
@@ -2769,9 +2769,9 @@ version = "1.18.0"
 
 [[deps.XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
-git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4"
+git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916"
 uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
-version = "2.10.4+0"
+version = "2.11.5+0"
 
 [[deps.XSLT_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]