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Merge #2080
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2080: Use Covariant123Vector DSS for Hyperdiffusion tendency r=sriharshakandala a=sriharshakandala



Co-authored-by: sriharshakandala <sriharsha.kvs@gmail.com>
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bors[bot] and sriharshakandala authored Sep 18, 2023
2 parents cb44933 + 2552fef commit 64fd7d6
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Showing 5 changed files with 220 additions and 212 deletions.
4 changes: 2 additions & 2 deletions .dev/Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -79,9 +79,9 @@ version = "0.21.4"

[[deps.JuliaFormatter]]
deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
git-tree-sha1 = "680fb31c8b8e2cf482f48e55d8fa01ccc4469e04"
git-tree-sha1 = "2aa8cb5410821365a87f326631d7f6ce07db8882"
uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
version = "1.0.35"
version = "1.0.36"

[[deps.LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
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95 changes: 51 additions & 44 deletions docs/Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -5,9 +5,9 @@ manifest_format = "2.0"
project_hash = "7fc686bc0a71a5f83e48b1285d03c4910b039279"

[[deps.ADTypes]]
git-tree-sha1 = "a4c8e0f8c09d4aa708289c1a5fc23e2d1970017a"
git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003"
uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
version = "0.2.1"
version = "0.2.4"

[[deps.AMD]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
Expand Down Expand Up @@ -92,9 +92,9 @@ version = "0.1.29"

[[deps.ArrayLayouts]]
deps = ["FillArrays", "LinearAlgebra"]
git-tree-sha1 = "dcda7e0ac618210eabf43751d5cafde100dd539b"
git-tree-sha1 = "0d61921af2799487b80453a44abb57db7a0c1381"
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weakdeps = ["SparseArrays"]

[deps.ArrayLayouts.extensions]
Expand All @@ -110,10 +110,10 @@ version = "0.2.0"
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"

[[deps.AtmosphericProfilesLibrary]]
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version = "0.1.4"

[[deps.Atomix]]
deps = ["UnsafeAtomics"]
Expand Down Expand Up @@ -194,15 +194,15 @@ version = "0.1.2"

[[deps.CLIMAParameters]]
deps = ["DocStringExtensions", "TOML", "Test"]
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Expand Down Expand Up @@ -260,9 +260,9 @@ version = "0.5.3"

[[deps.ClimaCore]]
deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"]
git-tree-sha1 = "f8c0f248eb34fb222455830e35a17f4d1bef9e1c"
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version = "0.10.50"

[[deps.ClimaTimeSteppers]]
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Expand All @@ -278,9 +278,9 @@ version = "0.1.12"

[[deps.CloudMicrophysics]]
deps = ["CLIMAParameters", "DocStringExtensions", "ForwardDiff", "KernelAbstractions", "NonlinearSolve", "SpecialFunctions", "Thermodynamics"]
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[[deps.ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
Expand Down Expand Up @@ -343,9 +343,9 @@ version = "0.3.2"

[[deps.ConstructionBase]]
deps = ["LinearAlgebra"]
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weakdeps = ["IntervalSets", "StaticArrays"]

[deps.ConstructionBase.extensions]
Expand Down Expand Up @@ -414,9 +414,9 @@ version = "0.1.0+0"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
git-tree-sha1 = "df8638dbfa03d1b336c410e23a9dfbf89cb53937"
git-tree-sha1 = "dee066b8dce741815729f5973b6db757416948b7"
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version = "6.128.2"
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[deps.DiffEqBase.extensions]
DiffEqBaseDistributionsExt = "Distributions"
Expand Down Expand Up @@ -504,9 +504,9 @@ version = "0.27.25"

[[deps.DocumenterCitations]]
deps = ["Bibliography", "Documenter", "Markdown", "OrderedCollections", "Unicode"]
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[[deps.Downloads]]
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Expand All @@ -530,10 +530,10 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
version = "1.0.4"

[[deps.ExponentialUtilities]]
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[[deps.ExprTools]]
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Expand Down Expand Up @@ -690,10 +690,14 @@ uuid = "86223c79-3864-5bf0-83f7-82e725a168b6"
version = "1.8.0"

[[deps.HDF5]]
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deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
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[deps.HDF5.extensions]
MPIExt = "MPI"

[[deps.HDF5_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
Expand Down Expand Up @@ -827,9 +831,9 @@ version = "0.2.1+0"

[[deps.KLU]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
git-tree-sha1 = "764164ed65c30738750965d55652db9c94c59bfe"
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[[deps.KernelAbstractions]]
deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"]
Expand Down Expand Up @@ -1116,9 +1120,9 @@ version = "4.5.1"

[[deps.NVTX]]
deps = ["Colors", "JuliaNVTXCallbacks_jll", "Libdl", "NVTX_jll"]
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git-tree-sha1 = "8bc9ce4233be3c63f8dcd78ccaf1b63a9c0baa34"
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version = "0.3.2"
version = "0.3.3"

[[deps.NVTX_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
Expand Down Expand Up @@ -1236,9 +1240,9 @@ version = "0.3.3"

[[deps.Polyester]]
deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"]
git-tree-sha1 = "3d811babe092a6e7b130beee84998fe7663348b6"
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[[deps.PolyesterWeave]]
deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"]
Expand Down Expand Up @@ -1342,17 +1346,19 @@ version = "1.3.4"

[[deps.RecursiveArrayTools]]
deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
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[deps.RecursiveArrayTools.extensions]
RecursiveArrayToolsMeasurementsExt = "Measurements"
RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements"
RecursiveArrayToolsTrackerExt = "Tracker"
RecursiveArrayToolsZygoteExt = "Zygote"

[deps.RecursiveArrayTools.weakdeps]
Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"

Expand Down Expand Up @@ -1413,10 +1419,10 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa"
version = "0.6.39"

[[deps.SciMLBase]]
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deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
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[deps.SciMLBase.extensions]
ZygoteExt = "Zygote"
Expand Down Expand Up @@ -1499,9 +1505,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[deps.SparseDiffTools]]
deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"]
git-tree-sha1 = "b3eb6747277d9919f5527ad9053f6d2fb1166516"
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[deps.SparseDiffTools.extensions]
SparseDiffToolsEnzymeExt = "Enzyme"
Expand Down Expand Up @@ -1554,9 +1560,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"]

[[deps.StaticArrays]]
deps = ["LinearAlgebra", "Random", "StaticArraysCore"]
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weakdeps = ["Statistics"]

[deps.StaticArrays.extensions]
Expand Down Expand Up @@ -1611,9 +1617,10 @@ uuid = "69024149-9ee7-55f6-a4c4-859efe599b68"
version = "0.3.7"

[[deps.StringManipulation]]
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version = "0.3.0"
version = "0.3.4"

[[deps.StructTypes]]
deps = ["Dates", "UUIDs"]
Expand Down
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