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Update dependencies
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@sriharshakandala
sriharshakandala committed Sep 18, 2023
1 parent 87d91cc commit bd26056
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Showing 4 changed files with 221 additions and 208 deletions.
4 changes: 2 additions & 2 deletions .dev/Manifest.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -79,9 +79,9 @@ version = "0.21.4"

[[deps.JuliaFormatter]]
deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
git-tree-sha1 = "680fb31c8b8e2cf482f48e55d8fa01ccc4469e04"
git-tree-sha1 = "2aa8cb5410821365a87f326631d7f6ce07db8882"
uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
version = "1.0.35"
version = "1.0.36"

[[deps.LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
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95 changes: 51 additions & 44 deletions docs/Manifest.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -5,9 +5,9 @@ manifest_format = "2.0"
project_hash = "7fc686bc0a71a5f83e48b1285d03c4910b039279"

[[deps.ADTypes]]
git-tree-sha1 = "a4c8e0f8c09d4aa708289c1a5fc23e2d1970017a"
git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003"
uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
version = "0.2.1"
version = "0.2.4"

[[deps.AMD]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
Expand Down Expand Up @@ -92,9 +92,9 @@ version = "0.1.29"

[[deps.ArrayLayouts]]
deps = ["FillArrays", "LinearAlgebra"]
git-tree-sha1 = "dcda7e0ac618210eabf43751d5cafde100dd539b"
git-tree-sha1 = "0d61921af2799487b80453a44abb57db7a0c1381"
uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
version = "1.3.0"
version = "1.4.1"
weakdeps = ["SparseArrays"]

[deps.ArrayLayouts.extensions]
Expand All @@ -110,10 +110,10 @@ version = "0.2.0"
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"

[[deps.AtmosphericProfilesLibrary]]
deps = ["Dierckx"]
git-tree-sha1 = "66f7e7f704c848d5b09bd11c980bc28d83f75c77"
deps = ["Dierckx", "LinearAlgebra"]
git-tree-sha1 = "c6be1ce28b7870a60400c51c75dc1b08d6a8dd73"
uuid = "86bc3604-9858-485a-bdbe-831ec50de11d"
version = "0.1.3"
version = "0.1.4"

[[deps.Atomix]]
deps = ["UnsafeAtomics"]
Expand Down Expand Up @@ -194,15 +194,15 @@ version = "0.1.2"

[[deps.CLIMAParameters]]
deps = ["DocStringExtensions", "TOML", "Test"]
git-tree-sha1 = "7b3163ccbd056dabd7ec648101830e9a6ccd019d"
git-tree-sha1 = "d35d039179f27abc063f7ae5c564573fe5316bb2"
uuid = "6eacf6c3-8458-43b9-ae03-caf5306d3d53"
version = "0.7.14"
version = "0.7.19"

[[deps.CPUSummary]]
deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
git-tree-sha1 = "89e0654ed8c7aebad6d5ad235d6242c2d737a928"
git-tree-sha1 = "601f7e7b3d36f18790e2caf83a882d88e9b71ff1"
uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9"
version = "0.2.3"
version = "0.2.4"

[[deps.CUDA]]
deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"]
Expand Down Expand Up @@ -260,9 +260,9 @@ version = "0.5.3"

[[deps.ClimaCore]]
deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"]
git-tree-sha1 = "f8c0f248eb34fb222455830e35a17f4d1bef9e1c"
git-tree-sha1 = "6841faabcaf23af38190e92abdb5eec3e6f8601d"
uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
version = "0.10.49"
version = "0.10.50"

[[deps.ClimaTimeSteppers]]
deps = ["CUDA", "ClimaComms", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "SciMLBase", "StaticArrays"]
Expand All @@ -278,9 +278,9 @@ version = "0.1.12"

[[deps.CloudMicrophysics]]
deps = ["CLIMAParameters", "DocStringExtensions", "ForwardDiff", "KernelAbstractions", "NonlinearSolve", "SpecialFunctions", "Thermodynamics"]
git-tree-sha1 = "b9e41fe99cb337f9ca0bd8bf5f62d76d33273669"
git-tree-sha1 = "048ac0b6499d4fc9516edb59468670a62995fed6"
uuid = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b"
version = "0.13.2"
version = "0.13.3"

[[deps.ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
Expand Down Expand Up @@ -343,9 +343,9 @@ version = "0.3.2"

[[deps.ConstructionBase]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "fe2838a593b5f776e1597e086dcd47560d94e816"
git-tree-sha1 = "c53fc348ca4d40d7b371e71fd52251839080cbc9"
uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9"
version = "1.5.3"
version = "1.5.4"
weakdeps = ["IntervalSets", "StaticArrays"]

[deps.ConstructionBase.extensions]
Expand Down Expand Up @@ -414,9 +414,9 @@ version = "0.1.0+0"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
git-tree-sha1 = "df8638dbfa03d1b336c410e23a9dfbf89cb53937"
git-tree-sha1 = "dee066b8dce741815729f5973b6db757416948b7"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.128.2"
version = "6.128.4"

[deps.DiffEqBase.extensions]
DiffEqBaseDistributionsExt = "Distributions"
Expand Down Expand Up @@ -504,9 +504,9 @@ version = "0.27.25"

[[deps.DocumenterCitations]]
deps = ["Bibliography", "Documenter", "Markdown", "OrderedCollections", "Unicode"]
git-tree-sha1 = "b4b45d64eea45d96b5d35ec9ef4a0de15b7f2cdb"
git-tree-sha1 = "210f08c5b68e7c058aaa3ade24ff4fd7b6638789"
uuid = "daee34ce-89f3-4625-b898-19384cb65244"
version = "1.0.0"
version = "1.1.0"

[[deps.Downloads]]
deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
Expand All @@ -530,10 +530,10 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
version = "1.0.4"

[[deps.ExponentialUtilities]]
deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"]
git-tree-sha1 = "fb7dbef7d2631e2d02c49e2750f7447648b0ec9b"
deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "PrecompileTools", "Printf", "SparseArrays", "libblastrampoline_jll"]
git-tree-sha1 = "602e4585bcbd5a25bc06f514724593d13ff9e862"
uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18"
version = "1.24.0"
version = "1.25.0"

[[deps.ExprTools]]
git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec"
Expand Down Expand Up @@ -690,10 +690,14 @@ uuid = "86223c79-3864-5bf0-83f7-82e725a168b6"
version = "1.8.0"

[[deps.HDF5]]
deps = ["Compat", "HDF5_jll", "Libdl", "Mmap", "Printf", "Random", "Requires", "UUIDs"]
git-tree-sha1 = "114e20044677badbc631ee6fdc80a67920561a29"
deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b"
uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
version = "0.16.16"
version = "0.17.0"
weakdeps = ["MPI"]

[deps.HDF5.extensions]
MPIExt = "MPI"

[[deps.HDF5_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
Expand Down Expand Up @@ -827,9 +831,9 @@ version = "0.2.1+0"

[[deps.KLU]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
git-tree-sha1 = "764164ed65c30738750965d55652db9c94c59bfe"
git-tree-sha1 = "884c2968c2e8e7e6bf5956af88cb46aa745c854b"
uuid = "ef3ab10e-7fda-4108-b977-705223b18434"
version = "0.4.0"
version = "0.4.1"

[[deps.KernelAbstractions]]
deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"]
Expand Down Expand Up @@ -1116,9 +1120,9 @@ version = "4.5.1"

[[deps.NVTX]]
deps = ["Colors", "JuliaNVTXCallbacks_jll", "Libdl", "NVTX_jll"]
git-tree-sha1 = "ab760fa11c7f12df87334ea9e0dffc54af3025bc"
git-tree-sha1 = "8bc9ce4233be3c63f8dcd78ccaf1b63a9c0baa34"
uuid = "5da4648a-3479-48b8-97b9-01cb529c0a1f"
version = "0.3.2"
version = "0.3.3"

[[deps.NVTX_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
Expand Down Expand Up @@ -1236,9 +1240,9 @@ version = "0.3.3"

[[deps.Polyester]]
deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"]
git-tree-sha1 = "3d811babe092a6e7b130beee84998fe7663348b6"
git-tree-sha1 = "d4c9ebdc6528a4aaf7cfcf43b482e927267b400d"
uuid = "f517fe37-dbe3-4b94-8317-1923a5111588"
version = "0.7.5"
version = "0.7.6"

[[deps.PolyesterWeave]]
deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"]
Expand Down Expand Up @@ -1342,17 +1346,19 @@ version = "1.3.4"

[[deps.RecursiveArrayTools]]
deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0"
git-tree-sha1 = "d7087c013e8a496ff396bae843b1e16d9a30ede8"
uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
version = "2.38.7"
version = "2.38.10"

[deps.RecursiveArrayTools.extensions]
RecursiveArrayToolsMeasurementsExt = "Measurements"
RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements"
RecursiveArrayToolsTrackerExt = "Tracker"
RecursiveArrayToolsZygoteExt = "Zygote"

[deps.RecursiveArrayTools.weakdeps]
Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"

Expand Down Expand Up @@ -1413,10 +1419,10 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa"
version = "0.6.39"

[[deps.SciMLBase]]
deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
git-tree-sha1 = "54b005258bb5ee4b6fd0f440b528e7b7af4c9975"
deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
git-tree-sha1 = "6de099dba3c80e23bde1d19011161ea91a23ed6b"
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
version = "1.96.2"
version = "1.98.0"

[deps.SciMLBase.extensions]
ZygoteExt = "Zygote"
Expand Down Expand Up @@ -1499,9 +1505,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[deps.SparseDiffTools]]
deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"]
git-tree-sha1 = "b3eb6747277d9919f5527ad9053f6d2fb1166516"
git-tree-sha1 = "42d131931906bf4f0af97a7113c8456d0a8aff9d"
uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804"
version = "2.5.1"
version = "2.6.0"

[deps.SparseDiffTools.extensions]
SparseDiffToolsEnzymeExt = "Enzyme"
Expand Down Expand Up @@ -1554,9 +1560,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"]

[[deps.StaticArrays]]
deps = ["LinearAlgebra", "Random", "StaticArraysCore"]
git-tree-sha1 = "9cabadf6e7cd2349b6cf49f1915ad2028d65e881"
git-tree-sha1 = "51621cca8651d9e334a659443a74ce50a3b6dfab"
uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "1.6.2"
version = "1.6.3"
weakdeps = ["Statistics"]

[deps.StaticArrays.extensions]
Expand Down Expand Up @@ -1611,9 +1617,10 @@ uuid = "69024149-9ee7-55f6-a4c4-859efe599b68"
version = "0.3.7"

[[deps.StringManipulation]]
git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123"
deps = ["PrecompileTools"]
git-tree-sha1 = "a04cabe79c5f01f4d723cc6704070ada0b9d46d5"
uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e"
version = "0.3.0"
version = "0.3.4"

[[deps.StructTypes]]
deps = ["Dates", "UUIDs"]
Expand Down
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