Update manifests

CliMA · Sep 8, 2023 · cd95efb · cd95efb
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Showing 3 changed files with 55 additions and 52 deletions.
diff --git a/docs/Manifest.toml b/docs/Manifest.toml
@@ -5,9 +5,9 @@ manifest_format = "2.0"
 project_hash = "813a39123d5089f49d5cde44ee40847faefe369c"
 
 [[deps.ADTypes]]
-git-tree-sha1 = "a4c8e0f8c09d4aa708289c1a5fc23e2d1970017a"
+git-tree-sha1 = "d68758475ff90600488eb975b5ac222709a7dd6f"
 uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-version = "0.2.1"
+version = "0.2.2"
 
 [[deps.AMD]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
@@ -110,10 +110,10 @@ version = "0.2.0"
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
 
 [[deps.AtmosphericProfilesLibrary]]
-deps = ["Dierckx"]
-git-tree-sha1 = "66f7e7f704c848d5b09bd11c980bc28d83f75c77"
+deps = ["Dierckx", "LinearAlgebra"]
+git-tree-sha1 = "c6be1ce28b7870a60400c51c75dc1b08d6a8dd73"
 uuid = "86bc3604-9858-485a-bdbe-831ec50de11d"
-version = "0.1.3"
+version = "0.1.4"
 
 [[deps.Atomix]]
 deps = ["UnsafeAtomics"]
@@ -194,9 +194,9 @@ version = "0.1.2"
 
 [[deps.CLIMAParameters]]
 deps = ["DocStringExtensions", "TOML", "Test"]
-git-tree-sha1 = "7b3163ccbd056dabd7ec648101830e9a6ccd019d"
+git-tree-sha1 = "91ba1a09c86300e814655914b120183ee16cdc53"
 uuid = "6eacf6c3-8458-43b9-ae03-caf5306d3d53"
-version = "0.7.14"
+version = "0.7.15"
 
 [[deps.CPUSummary]]
 deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
@@ -247,7 +247,7 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
 version = "1.16.0"
 
 [[deps.ClimaAtmos]]
-deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqBase", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"]
+deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "SciMLBase", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"]
 path = ".."
 uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717"
 version = "0.16.0"
@@ -278,9 +278,9 @@ version = "0.1.12"
 
 [[deps.CloudMicrophysics]]
 deps = ["CLIMAParameters", "DocStringExtensions", "ForwardDiff", "KernelAbstractions", "NonlinearSolve", "SpecialFunctions", "Thermodynamics"]
-git-tree-sha1 = "b9e41fe99cb337f9ca0bd8bf5f62d76d33273669"
+git-tree-sha1 = "048ac0b6499d4fc9516edb59468670a62995fed6"
 uuid = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b"
-version = "0.13.2"
+version = "0.13.3"
 
 [[deps.ColorTypes]]
 deps = ["FixedPointNumbers", "Random"]
@@ -697,9 +697,9 @@ version = "0.16.16"
 
 [[deps.HDF5_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"]
-git-tree-sha1 = "10c72358aaaa5cd6bc7cc39b95e6eadf92f5a336"
+git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739"
 uuid = "0234f1f7-429e-5d53-9886-15a909be8d59"
-version = "1.14.2+0"
+version = "1.14.2+1"
 
 [[deps.HostCPUFeatures]]
 deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"]
@@ -1342,9 +1342,9 @@ version = "1.3.4"
 
 [[deps.RecursiveArrayTools]]
 deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
-git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0"
+git-tree-sha1 = "5f834446731ba29d1d68d91fddf8f9593b68b7a2"
 uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
-version = "2.38.7"
+version = "2.38.8"
 
     [deps.RecursiveArrayTools.extensions]
     RecursiveArrayToolsMeasurementsExt = "Measurements"
@@ -1574,9 +1574,9 @@ version = "1.9.0"
 
 [[deps.StatsAPI]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7"
+git-tree-sha1 = "1ff449ad350c9c4cbc756624d6f8a8c3ef56d3ed"
 uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
-version = "1.6.0"
+version = "1.7.0"
 
 [[deps.StatsBase]]
 deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
@@ -1611,9 +1611,10 @@ uuid = "69024149-9ee7-55f6-a4c4-859efe599b68"
 version = "0.3.7"
 
 [[deps.StringManipulation]]
-git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123"
+deps = ["PrecompileTools"]
+git-tree-sha1 = "25ad9b0ccbc6cc63dfff1eb3f4bbb4d3e0d8a491"
 uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e"
-version = "0.3.0"
+version = "0.3.2"
 
 [[deps.StructTypes]]
 deps = ["Dates", "UUIDs"]

diff --git a/examples/Manifest.toml b/examples/Manifest.toml
@@ -5,9 +5,9 @@ manifest_format = "2.0"
 project_hash = "29934b734692261a625d91c36cff961d40b7b683"
 
 [[deps.ADTypes]]
-git-tree-sha1 = "a4c8e0f8c09d4aa708289c1a5fc23e2d1970017a"
+git-tree-sha1 = "d68758475ff90600488eb975b5ac222709a7dd6f"
 uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-version = "0.2.1"
+version = "0.2.2"
 
 [[deps.AMD]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
@@ -116,10 +116,10 @@ version = "0.2.0"
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
 
 [[deps.AtmosphericProfilesLibrary]]
-deps = ["Dierckx"]
-git-tree-sha1 = "66f7e7f704c848d5b09bd11c980bc28d83f75c77"
+deps = ["Dierckx", "LinearAlgebra"]
+git-tree-sha1 = "c6be1ce28b7870a60400c51c75dc1b08d6a8dd73"
 uuid = "86bc3604-9858-485a-bdbe-831ec50de11d"
-version = "0.1.3"
+version = "0.1.4"
 
 [[deps.Atomix]]
 deps = ["UnsafeAtomics"]
@@ -200,9 +200,9 @@ version = "0.1.2"
 
 [[deps.CLIMAParameters]]
 deps = ["DocStringExtensions", "TOML", "Test"]
-git-tree-sha1 = "7b3163ccbd056dabd7ec648101830e9a6ccd019d"
+git-tree-sha1 = "91ba1a09c86300e814655914b120183ee16cdc53"
 uuid = "6eacf6c3-8458-43b9-ae03-caf5306d3d53"
-version = "0.7.14"
+version = "0.7.15"
 
 [[deps.CPUSummary]]
 deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
@@ -286,7 +286,7 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
 version = "1.16.0"
 
 [[deps.ClimaAtmos]]
-deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqBase", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"]
+deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "SciMLBase", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"]
 path = ".."
 uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717"
 version = "0.16.0"
@@ -347,9 +347,9 @@ version = "0.1.12"
 
 [[deps.CloudMicrophysics]]
 deps = ["CLIMAParameters", "DocStringExtensions", "ForwardDiff", "KernelAbstractions", "NonlinearSolve", "SpecialFunctions", "Thermodynamics"]
-git-tree-sha1 = "b9e41fe99cb337f9ca0bd8bf5f62d76d33273669"
+git-tree-sha1 = "048ac0b6499d4fc9516edb59468670a62995fed6"
 uuid = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b"
-version = "0.13.2"
+version = "0.13.3"
 
 [[deps.CodeTracking]]
 deps = ["InteractiveUtils", "UUIDs"]
@@ -2030,9 +2030,9 @@ version = "0.6.12"
 
 [[deps.RecursiveArrayTools]]
 deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
-git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0"
+git-tree-sha1 = "5f834446731ba29d1d68d91fddf8f9593b68b7a2"
 uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
-version = "2.38.7"
+version = "2.38.8"
 
     [deps.RecursiveArrayTools.extensions]
     RecursiveArrayToolsMeasurementsExt = "Measurements"
@@ -2349,9 +2349,9 @@ version = "1.9.0"
 
 [[deps.StatsAPI]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7"
+git-tree-sha1 = "1ff449ad350c9c4cbc756624d6f8a8c3ef56d3ed"
 uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
-version = "1.6.0"
+version = "1.7.0"
 
 [[deps.StatsBase]]
 deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
@@ -2386,9 +2386,10 @@ uuid = "69024149-9ee7-55f6-a4c4-859efe599b68"
 version = "0.3.7"
 
 [[deps.StringManipulation]]
-git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123"
+deps = ["PrecompileTools"]
+git-tree-sha1 = "25ad9b0ccbc6cc63dfff1eb3f4bbb4d3e0d8a491"
 uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e"
-version = "0.3.0"
+version = "0.3.2"
 
 [[deps.StructArrays]]
 deps = ["Adapt", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"]

diff --git a/perf/Manifest.toml b/perf/Manifest.toml
@@ -5,9 +5,9 @@ manifest_format = "2.0"
 project_hash = "967da1a008eca13e2322097c9c4f6c2a0c6d67ad"
 
 [[deps.ADTypes]]
-git-tree-sha1 = "a4c8e0f8c09d4aa708289c1a5fc23e2d1970017a"
+git-tree-sha1 = "d68758475ff90600488eb975b5ac222709a7dd6f"
 uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-version = "0.2.1"
+version = "0.2.2"
 
 [[deps.AMD]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
@@ -116,10 +116,10 @@ version = "0.2.0"
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
 
 [[deps.AtmosphericProfilesLibrary]]
-deps = ["Dierckx"]
-git-tree-sha1 = "66f7e7f704c848d5b09bd11c980bc28d83f75c77"
+deps = ["Dierckx", "LinearAlgebra"]
+git-tree-sha1 = "c6be1ce28b7870a60400c51c75dc1b08d6a8dd73"
 uuid = "86bc3604-9858-485a-bdbe-831ec50de11d"
-version = "0.1.3"
+version = "0.1.4"
 
 [[deps.Atomix]]
 deps = ["UnsafeAtomics"]
@@ -211,9 +211,9 @@ version = "0.1.2"
 
 [[deps.CLIMAParameters]]
 deps = ["DocStringExtensions", "TOML", "Test"]
-git-tree-sha1 = "7b3163ccbd056dabd7ec648101830e9a6ccd019d"
+git-tree-sha1 = "91ba1a09c86300e814655914b120183ee16cdc53"
 uuid = "6eacf6c3-8458-43b9-ae03-caf5306d3d53"
-version = "0.7.14"
+version = "0.7.15"
 
 [[deps.CPUSummary]]
 deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
@@ -297,7 +297,7 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
 version = "1.16.0"
 
 [[deps.ClimaAtmos]]
-deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqBase", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"]
+deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "SciMLBase", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"]
 path = ".."
 uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717"
 version = "0.16.0"
@@ -358,9 +358,9 @@ version = "0.1.12"
 
 [[deps.CloudMicrophysics]]
 deps = ["CLIMAParameters", "DocStringExtensions", "ForwardDiff", "KernelAbstractions", "NonlinearSolve", "SpecialFunctions", "Thermodynamics"]
-git-tree-sha1 = "b9e41fe99cb337f9ca0bd8bf5f62d76d33273669"
+git-tree-sha1 = "048ac0b6499d4fc9516edb59468670a62995fed6"
 uuid = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b"
-version = "0.13.2"
+version = "0.13.3"
 
 [[deps.CodeTracking]]
 deps = ["InteractiveUtils", "UUIDs"]
@@ -2094,9 +2094,9 @@ version = "0.6.12"
 
 [[deps.RecursiveArrayTools]]
 deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
-git-tree-sha1 = "7ed35fb5f831aaf09c2d7c8736d44667a1afdcb0"
+git-tree-sha1 = "5f834446731ba29d1d68d91fddf8f9593b68b7a2"
 uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
-version = "2.38.7"
+version = "2.38.8"
 
     [deps.RecursiveArrayTools.extensions]
     RecursiveArrayToolsMeasurementsExt = "Measurements"
@@ -2431,9 +2431,9 @@ version = "1.9.0"
 
 [[deps.StatsAPI]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7"
+git-tree-sha1 = "1ff449ad350c9c4cbc756624d6f8a8c3ef56d3ed"
 uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
-version = "1.6.0"
+version = "1.7.0"
 
 [[deps.StatsBase]]
 deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
@@ -2468,9 +2468,10 @@ uuid = "69024149-9ee7-55f6-a4c4-859efe599b68"
 version = "0.3.7"
 
 [[deps.StringManipulation]]
-git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123"
+deps = ["PrecompileTools"]
+git-tree-sha1 = "25ad9b0ccbc6cc63dfff1eb3f4bbb4d3e0d8a491"
 uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e"
-version = "0.3.0"
+version = "0.3.2"
 
 [[deps.StructArrays]]
 deps = ["Adapt", "DataAPI", "GPUArraysCore", "StaticArraysCore", "Tables"]
@@ -2623,9 +2624,9 @@ version = "1.3.0"
 
 [[deps.TypedSyntax]]
 deps = ["CodeTracking", "JuliaSyntax"]
-git-tree-sha1 = "34f0ab1aa1b869840cfc4e1e33074030e90ece7e"
+git-tree-sha1 = "79ea8a4993ed5d341580c4044433e0259fceb4c6"
 uuid = "d265eb64-f81a-44ad-a842-4247ee1503de"
-version = "1.2.2"
+version = "1.2.3"
 
 [[deps.URIs]]
 git-tree-sha1 = "b7a5e99f24892b6824a954199a45e9ffcc1c70f0"