build based on 847c291

dev/.documenter-siteinfo.json

@@ -1 +1 @@
-{"documenter":{"julia_version":"1.10.5","generation_timestamp":"2024-09-03T01:04:35","documenter_version":"1.6.0"}}
+{"documenter":{"julia_version":"1.10.5","generation_timestamp":"2024-09-05T20:24:42","documenter_version":"1.6.0"}}

dev/diagnostics/available_diagnostics/index.html

@@ -278,4 +278,4 @@
 ├────────────┼─────────────────┼──────────┼──────────────────────────────────┼─────────────────┤
 │ wsoil      │ subsurface      │ m        │ Soil water content.              │ subsurface_wate │
 │            │ Water Storage   │          │                                  │ r_storage       │
-└────────────┴─────────────────┴──────────┴──────────────────────────────────┴─────────────────┘</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../developers_diagnostics/">« For developers</a><a class="docs-footer-nextpage" href="../../Contributing/">Contribution guide »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Tuesday 3 September 2024 01:04">Tuesday 3 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+└────────────┴─────────────────┴──────────┴──────────────────────────────────┴─────────────────┘</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../developers_diagnostics/">« For developers</a><a class="docs-footer-nextpage" href="../../Contributing/">Contribution guide »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Thursday 5 September 2024 20:24">Thursday 5 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

dev/diagnostics/developers_diagnostics/index.html

@@ -41,4 +41,4 @@
     t_start,
     short_names...;
     pre_output_hook! = average_pre_output_hook!,
-)</code></pre><p>will return a list of <code>ScheduledDiagnostics</code> that compute the hourly average for the given variables listed in <code>short_names</code>. We also, so far, provide functions for mins, maxs and averages aggregated monthly, over ten days, daily, and hourly. As a developer, you may want to add more standard diagnostics here.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../users_diagnostics/">« For users</a><a class="docs-footer-nextpage" href="../available_diagnostics/">Available diagnostics »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Tuesday 3 September 2024 01:04">Tuesday 3 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+)</code></pre><p>will return a list of <code>ScheduledDiagnostics</code> that compute the hourly average for the given variables listed in <code>short_names</code>. We also, so far, provide functions for mins, maxs and averages aggregated monthly, over ten days, daily, and hourly. As a developer, you may want to add more standard diagnostics here.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../users_diagnostics/">« For users</a><a class="docs-footer-nextpage" href="../available_diagnostics/">Available diagnostics »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Thursday 5 September 2024 20:24">Thursday 5 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

dev/diagnostics/users_diagnostics/index.html

@@ -55,4 +55,4 @@
 
 viz.plot!(fig, var) # creates an axis inside fig, and plot your var in it.
 
-CairoMakie.save(fig) # saves the figure in current working directory</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../standalone/pages/surface_water/surface_water_model/">« Surface water model</a><a class="docs-footer-nextpage" href="../developers_diagnostics/">For developers »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Tuesday 3 September 2024 01:04">Tuesday 3 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+CairoMakie.save(fig) # saves the figure in current working directory</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../standalone/pages/surface_water/surface_water_model/">« Surface water model</a><a class="docs-footer-nextpage" href="../developers_diagnostics/">For developers »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Thursday 5 September 2024 20:24">Thursday 5 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

dev/generated/integrated/soil_canopy_tutorial/index.html

@@ -335,4 +335,4 @@
     xlim = [minimum(daily), maximum(daily)],
     size = (500, 700),
     margins = 10Plots.mm,
-);</code></pre><p>And save the output</p><pre><code class="language-julia hljs">savefig(&quot;ozark_soil_plant_flux.png&quot;);</code></pre><p><img src="../ozark_soil_plant_flux.png" alt/></p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../standalone/Canopy/canopy_tutorial/">« Standalone Canopy</a><a class="docs-footer-nextpage" href="../../standalone/Snow/base_tutorial/">Seasonal Snow Timeseries Generation with a Neural Network »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Tuesday 3 September 2024 01:04">Tuesday 3 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+);</code></pre><p>And save the output</p><pre><code class="language-julia hljs">savefig(&quot;ozark_soil_plant_flux.png&quot;);</code></pre><p><img src="../ozark_soil_plant_flux.png" alt/></p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../standalone/Canopy/canopy_tutorial/">« Standalone Canopy</a><a class="docs-footer-nextpage" href="../../standalone/Snow/base_tutorial/">Seasonal Snow Timeseries Generation with a Neural Network »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Thursday 5 September 2024 20:24">Thursday 5 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

dev/generated/shared_utilities/driver_tutorial/index.html

@@ -46,4 +46,4 @@
 @show(p.drivers);</code></pre><pre><code class="nohighlight hljs">p.drivers = (LW_d = [418.7382685853159], SW_d = [0.0], θs = [2.814306258618376])
 </code></pre><p>During a simulation, the drivers are updated in place in <code>p.drivers</code> via a &quot;callback&quot;, which is a function which is called a specified times or when certain criteria are met during a simulation. In general, then, we don&#39;t update drivers every timestep, but less frequently. For example, the simulation timestep may be 10 minutes, but we may only update the drivers every three hours:</p><pre><code class="language-julia hljs">updateat = collect(seconds[1]:(3600 * 3):seconds[end]);
 updatefunc = update_radiation!;
-cb = ClimaLand.DriverUpdateCallback(updateat, updatefunc);</code></pre><p>This callback must then be provided to the simulation <a href="https://docs.sciml.ai/DiffEqCallbacks/stable/"><code>solve</code></a> function.</p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../standalone/Usage/domain_tutorial/">« Intro to ClimaLand Domains</a><a class="docs-footer-nextpage" href="../../../standalone/pages/vegetation/radiative_transfer/beer_model/">Beer model »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Tuesday 3 September 2024 01:04">Tuesday 3 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+cb = ClimaLand.DriverUpdateCallback(updateat, updatefunc);</code></pre><p>This callback must then be provided to the simulation <a href="https://docs.sciml.ai/DiffEqCallbacks/stable/"><code>solve</code></a> function.</p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../standalone/Usage/domain_tutorial/">« Intro to ClimaLand Domains</a><a class="docs-footer-nextpage" href="../../../standalone/pages/vegetation/radiative_transfer/beer_model/">Beer model »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.6.0 on <span class="colophon-date" title="Thursday 5 September 2024 20:24">Thursday 5 September 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>