update changelog, dependencies, migration for 0.4.0

CHANGELOG.md

@@ -15,6 +15,29 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0).
 
 ### Fixed
 
+### [0.4.0] - 2022-04-06
+
+### Added
+
+- Extract functionality: ReviewDataset, Process
+- Developed LocalIndex, EnvironmentManager, OpenSearch
+- Curation model, including Resource installation and a "correction path"
+- Search operation (reintegrating paper_feed and local_paper_index)
+- Prep exclusion based on languages
+
+### Changed
+
+- Object-oriented refactoring of the whole codebase
+- Use Zotero translators (instead of bibutils) for imports
+- Duplicate identification (add FP safeguards based on LocalIndex, add a procedure for small samples)
+- Consistent PDF path handling
+- Structured data extraction based on csv
+
+### Fixed
+
+- Loggers
+- Performance issues in prep and status
+
 ### [0.3.0] - 2022-02-05
 
 ### Added

colrev_core/review_manager.py

@@ -307,11 +307,17 @@ def migrate_0_3_0(self) -> bool:
                 return True
             return False
 
+        def migrate_0_4_0(self) -> bool:
+
+            return True
+
         # next version should be:
-        # {'from': '0.3.0', "to": '0.4.0', 'script': migrate_0_3_0}
-        # {'from': '0.4.0', "to": upcoming_version, 'script': migrate_0_4_0}
+        # ...
+        # {'from': '0.4.0', "to": '0.5.0', 'script': migrate_0_4_0}
+        # {'from': '0.5.0', "to": upcoming_version, 'script': migrate_0_5_0}
         migration_scripts: typing.List[typing.Dict[str, typing.Any]] = [
-            {"from": "0.3.0", "to": upcoming_version, "script": migrate_0_3_0}
+            {"from": "0.3.0", "to": "0.4.0", "script": migrate_0_3_0},
+            {"from": "0.4.0", "to": upcoming_version, "script": migrate_0_4_0},
         ]
 
         while current_version in [x["from"] for x in migration_scripts]:

setup.py

@@ -18,13 +18,14 @@
     "beautifulsoup4==4.10.0",
     "Click==8.0.1",
     "click_completion==0.5.2",
+    "crossrefapi==1.5.0",
     "cx_Freeze==6.10",
     "daff==1.3.46",
     "dictdiffer==0.8.1",
-    "docker==5.0.3",
+    "docker_py==1.10.6",
     "GitPython==3.1.24",
     "ImageHash==4.2.0",
-    "lingua-language-detector==1.0.1",
+    "lingua==4.15.0",
     "lxml==4.5.0",
     "nameparser==1.0.6",
     "opensearch-py==1.1.0",
@@ -33,6 +34,8 @@
     "pdfminer.six==20211012",
     "pdf2image==1.16.0",
     "spacy==3.2.2",
+    "pathos==0.2.8",
+    "pandasql==0.7.3",
     "PyPDF2==1.26.0",
     "PyYAML==6.0",
     "p_tqdm==1.3.3",