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LegrandNico committed Mar 17, 2024
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8 changes: 4 additions & 4 deletions notebooks/0.1-Creating_networks.html
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Expand Up @@ -684,7 +684,7 @@ <h5>Continuous value coupling<a class="headerlink" href="#continuous-value-coupl
Adding 1000 new observations.
</pre></div>
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<img alt="../_images/5a5b1aa005fca4353090500f01ee33f4a1e77ecfcb3949ef134b19d5d3994fcd.png" src="../_images/5a5b1aa005fca4353090500f01ee33f4a1e77ecfcb3949ef134b19d5d3994fcd.png" />
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Expand Down Expand Up @@ -834,7 +834,7 @@ <h5>Coupling with binary nodes<a class="headerlink" href="#coupling-with-binary-
Adding 1000 new observations.
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<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;pyhgf.model.HGF at 0x76509c3c72b0&gt;
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;pyhgf.model.HGF at 0x7e84309d7a60&gt;
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Expand Down Expand Up @@ -961,10 +961,10 @@ <h1>System configuration<a class="headerlink" href="#system-configuration" title
jax : 0.4.19
jaxlib: 0.4.19

numpy : 1.22.0
sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]
matplotlib: 3.8.3
numpy : 1.22.0
seaborn : 0.13.2
sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]

Watermark: 2.4.3
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4 changes: 2 additions & 2 deletions notebooks/0.2-Theory.html
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Expand Up @@ -852,9 +852,9 @@ <h1>System configuration<a class="headerlink" href="#system-configuration" title
jaxlib: 0.4.19

sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]
seaborn : 0.13.2
matplotlib: 3.8.3
numpy : 1.22.0
matplotlib: 3.8.3
seaborn : 0.13.2

Watermark: 2.4.3
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24 changes: 12 additions & 12 deletions notebooks/1.1-Binary_HGF.html
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Expand Up @@ -797,7 +797,7 @@ <h4>Sampling<a class="headerlink" href="#sampling" title="Link to this heading">
</div>
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<img alt="../_images/3e4b9a6708c87bff39d9a4f267985ce99f855a0fbbeffd5411551a77cd05d5f5.png" src="../_images/3e4b9a6708c87bff39d9a4f267985ce99f855a0fbbeffd5411551a77cd05d5f5.png" />
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</section>
Expand Down Expand Up @@ -843,7 +843,7 @@ <h3>Using the learned parameters<a class="headerlink" href="#using-the-learned-p
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<img alt="../_images/a921e13b66cce10abecc563611494163e1415cf54029b4b94a6f4880e6883ba8.png" src="../_images/a921e13b66cce10abecc563611494163e1415cf54029b4b94a6f4880e6883ba8.png" />
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Expand All @@ -853,7 +853,7 @@ <h3>Using the learned parameters<a class="headerlink" href="#using-the-learned-p
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<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Array(202.53107, dtype=float32)
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Array(202.53014, dtype=float32)
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Expand Down Expand Up @@ -905,7 +905,7 @@ <h4>Visualizing the model<a class="headerlink" href="#id8" title="Link to this h
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<img alt="../_images/2ec19856911096fbe9c3234ef83ab3600af54719c813af4a3f819412cb3c0342.svg" src="../_images/2ec19856911096fbe9c3234ef83ab3600af54719c813af4a3f819412cb3c0342.svg" /></div>
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Expand Down Expand Up @@ -949,9 +949,9 @@ <h4>Sampling<a class="headerlink" href="#id9" title="Link to this heading">#</a>
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<progress value='4000' class='' max='4000' style='width:300px; height:20px; vertical-align: middle;'></progress>
100.00% [4000/4000 00:09&lt;00:00 Sampling 2 chains, 0 divergences]
100.00% [4000/4000 00:10&lt;00:00 Sampling 2 chains, 0 divergences]
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</div><div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 9 seconds.
</div><div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 10 seconds.
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<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>We recommend running at least 4 chains for robust computation of convergence diagnostics
Expand All @@ -967,7 +967,7 @@ <h4>Sampling<a class="headerlink" href="#id9" title="Link to this heading">#</a>
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</section>
Expand Down Expand Up @@ -1014,7 +1014,7 @@ <h3>Using the learned parameters<a class="headerlink" href="#id10" title="Link t
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Expand All @@ -1024,7 +1024,7 @@ <h3>Using the learned parameters<a class="headerlink" href="#id10" title="Link t
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<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Array(203.01614, dtype=float32)
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Array(203.01239, dtype=float32)
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Expand Down Expand Up @@ -1052,12 +1052,12 @@ <h1>System configuration<a class="headerlink" href="#system-configuration" title
jax : 0.4.19
jaxlib: 0.4.19

pymc : 5.11.0
jax : 0.4.19
sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]
matplotlib: 3.8.3
arviz : 0.17.1
seaborn : 0.13.2
pymc : 5.11.0
sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]
arviz : 0.17.1

Watermark: 2.4.3
</pre></div>
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14 changes: 7 additions & 7 deletions notebooks/1.2-Categorical_HGF.html
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Expand Up @@ -526,7 +526,7 @@ <h2>Simulating a dataset<a class="headerlink" href="#simulating-a-dataset" title
</div>
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<img alt="../_images/36ff3a0c0c954a466a6176808213bf24a84e5bb2860b1273785f57803ceece7b.png" src="../_images/36ff3a0c0c954a466a6176808213bf24a84e5bb2860b1273785f57803ceece7b.png" />
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<div class="admonition note">
Expand Down Expand Up @@ -642,7 +642,7 @@ <h3>Fitting the model forwards<a class="headerlink" href="#fitting-the-model-for
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<img alt="../_images/18426cb15a69862d227eae42b30b89a6430e696b308d3f16bf426d2a6db7dccc.png" src="../_images/18426cb15a69862d227eae42b30b89a6430e696b308d3f16bf426d2a6db7dccc.png" />
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</section>
Expand Down Expand Up @@ -796,14 +796,14 @@ <h1>System configuration<a class="headerlink" href="#system-configuration" title
jax : 0.4.19
jaxlib: 0.4.19

sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]
pymc : 5.11.0
arviz : 0.17.1
seaborn : 0.13.2
jax : 0.4.19
matplotlib: 3.8.3
sys : 3.10.13 (main, Aug 28 2023, 08:28:42) [GCC 11.4.0]
pytensor : 2.18.6
numpy : 1.22.0
matplotlib: 3.8.3
jax : 0.4.19
arviz : 0.17.1
seaborn : 0.13.2

Watermark: 2.4.3
</pre></div>
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