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Docker image #668

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@martinkilbinger martinkilbinger commented Nov 19, 2023

Summary

This PR add functionality to make a docker container run with shapepipe on canfar.
Changes:

  • Dockerfile updated to have sextractor and psfex installed from conda.
  • Added script to initialise conda env on canfar
  • Added script to call curl to run headless container on canfar.
  • Added nsswitch script to make things run smoothly on canfar (recommendation from Seb Fabbro).
  • Remove most library versions from environment.yml since they created fatal version inconsistencies
    (to be reviewed)
  • Removed pysap and mccd from requirements due to installation errors in those packages
    (to be reviewed)

Reviewer Checklist

Reviewers should tick the following boxes before approving and merging the PR.

  • The PR targets the develop branch
  • The PR is assigned to the developer
  • The PR has appropriate labels
  • The PR is included in appropriate projects and/or milestones
  • The PR includes a clear description of the proposed changes
  • If the PR addresses an open issue the description includes "closes #"
  • The code and documentation style match the current standards
  • Documentation has been added/updated consistently with the code
  • All CI tests are passing
  • API docs have been built and checked at least once (if relevant)
  • All changed files have been checked and comments provided to the developer
  • All of the reviewer's comments have been satisfactorily addressed by the developer

@martinkilbinger martinkilbinger deleted the docker_image branch February 11, 2024 11:53
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2 participants