Update to Milo 1.0.2

DanielEss-lab · Aug 23, 2021 · e4bad58 · e4bad58
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diff --git a/README.md b/README.md
@@ -1,5 +1,5 @@
 ### Please cite Milo as:
-Milo, Revision 1.0.1, M. S. Teynor, N. Wohlgemuth, L. Carlson, J. Huang, S. L. Pugh, B. O. Grant, R. S. Hamilton, R. Carlsen, and D. H. Ess, Brigham Young University, Provo UT, 2021.
+Milo, Revision 1.0.2, M. S. Teynor, N. Wohlgemuth, L. Carlson, J. Huang, S. L. Pugh, B. O. Grant, R. S. Hamilton, R. Carlsen, and D. H. Ess, Brigham Young University, Provo UT, 2021.
 
 ### Requirements
 #### Python:
@@ -12,11 +12,11 @@ Milo can interface with both Gaussian 16 and Gaussian 09 to perform force calcul
 Milo is only intended to work on a Linux based operating system through the command line.
 
 ### Installation Guide
-1. Unzip milo-1.0.1.zip in your home directory  
+1. Unzip milo-1.0.2.zip in your home directory  
 2. Add the following to your .bashrc:  
-  `export PYTHONPATH=$PYTHONPATH:$HOME/milo-1.0.0`  
+  `export PYTHONPATH=$PYTHONPATH:$HOME/milo-1.0.2`  
 3. (Optional) Also add the following to your .bashrc, to make calling scripts easier:  
-	`export PATH=$PATH:$HOME/milo-1.0.0/milo/tools`  
+	`export PATH=$PATH:$HOME/milo-1.0.2/milo_1_0_2/tools`  
 	`module load python/3.8`  
 4. Source your .bashrc or restart your session.  
 
@@ -26,9 +26,9 @@ You are now ready to run your first Milo job.
 To run a Milo job with Gaussian 16:  
 	`module load python/3.8`  
 	`module load g16`  
-	`python -m milo < job.in > job.out`  
+	`python -m milo_1_0_2 < job.in > job.out`  
 
 To run a Milo job with Gaussian 09:  
 	`module load python/3.8`  
 	`module load g09`  
-	`python -m milo < job.in > job.out`  
+	`python -m milo_1_0_2 < job.in > job.out`  
diff --git a/docs/Milo 1.0.1 User Manual.pdf b/docs/Milo 1.0.1 User Manual.pdf
diff --git a/docs/Milo 1.0.2 User Manual.pdf b/docs/Milo 1.0.2 User Manual.pdf
diff --git a/milo_1_0_1/__init__.py → milo_1_0_2/__init__.py b/milo_1_0_1/__init__.py → milo_1_0_2/__init__.py
@@ -1 +1 @@
-"""Declare Milo as a package."""
+"""Declare Milo as a package."""
diff --git a/milo_1_0_1/__main__.py → milo_1_0_2/__main__.py b/milo_1_0_1/__main__.py → milo_1_0_2/__main__.py
@@ -1,7 +1,7 @@
-#!/usr/bin/env python3
-# -*- coding: utf-8 -*-
-"""Run Milo."""
-
-from milo_1_0_1 import main
-
-main.main()
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+"""Run Milo."""
+
+from milo_1_0_2 import main
+
+main.main()
diff --git a/milo_1_0_1/atom.py → milo_1_0_2/atom.py b/milo_1_0_1/atom.py → milo_1_0_2/atom.py