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@DataBiosphere

Data Biosphere

We are creating a vibrant ecosystem of interoperable modules and data environments for the biomedical community.

Popular repositories Loading

  1. toil toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    Python 901 240

  2. dsub dsub Public

    Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.

    Python 265 44

  3. terra-ui terra-ui Public

    Web user interface for the Terra platform

    TypeScript 52 21

  4. leonardo leonardo Public

    Notebook service

    Scala 44 21

  5. terra-docker terra-docker Public

    Jupyter Notebook 27 34

  6. job-manager job-manager Public

    Job Manager API and UI for interacting with asynchronous batch jobs and workflows.

    TypeScript 26 5

Repositories

Showing 10 of 160 repositories
  • jade-data-repo Public

    The Terra Data Repository built by the Jade team.

    DataBiosphere/jade-data-repo’s past year of commit activity
    Java 13 BSD-3-Clause 5 0 13 Updated Nov 26, 2024
  • terra-ui Public

    Web user interface for the Terra platform

    DataBiosphere/terra-ui’s past year of commit activity
    TypeScript 52 BSD-3-Clause 21 145 13 Updated Nov 26, 2024
  • leonardo Public

    Notebook service

    DataBiosphere/leonardo’s past year of commit activity
    Scala 44 BSD-3-Clause 21 1 18 Updated Nov 26, 2024
  • bard Public

    Metrics collection service

    DataBiosphere/bard’s past year of commit activity
    JavaScript 3 0 0 1 Updated Nov 26, 2024
  • azul Public

    Metadata indexer and query service used for AnVIL, HCA, LungMAP, and CGP

    DataBiosphere/azul’s past year of commit activity
    Python 7 Apache-2.0 2 737 20 Updated Nov 26, 2024
  • terra-scientific-pipelines-service-cli Public
    DataBiosphere/terra-scientific-pipelines-service-cli’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 1 Updated Nov 26, 2024
  • duos-ui Public

    Broad Institute Data Use Oversight System

    DataBiosphere/duos-ui’s past year of commit activity
    JavaScript 9 BSD-3-Clause 4 0 6 Updated Nov 26, 2024
  • terra-scientific-pipelines-service Public
    DataBiosphere/terra-scientific-pipelines-service’s past year of commit activity
    Java 0 BSD-3-Clause 0 0 5 Updated Nov 26, 2024
  • azul-github-labeler-action Public

    github action to automatically apply orange label

    DataBiosphere/azul-github-labeler-action’s past year of commit activity
    JavaScript 0 MIT 0 0 0 Updated Nov 26, 2024
  • tanagra Public

    Repo for the Tanagra service being developed by the All of Us DRC

    DataBiosphere/tanagra’s past year of commit activity
    Java 2 BSD-3-Clause 1 0 11 Updated Nov 26, 2024
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