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@Dfam-consortium

Dfam Consortium

Resources for the Study of Transposable Element Families

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  1. RepeatModeler RepeatModeler Public

    De-Novo Repeat Discovery Tool

    Perl 184 23

  2. TETools TETools Public

    Dfam Transposable Element Tools Docker container.

    Perl 82 17

  3. FamDB FamDB Public

    FamDB file format library and utilities

    Python 16 1

  4. AlignmentSummaryViewer AlignmentSummaryViewer Public

    Multiple sequence alignment visualization component

    HTML 4

  5. RepeatMasker_Nextflow RepeatMasker_Nextflow Public

    Nextflow script for running RepeatMasker on a cluster

    Perl 4

  6. Dfam-js Dfam-js Public

    Dfam/Dfam_consensus javascript library

    JavaScript 1

Repositories

Showing 10 of 14 repositories
  • FamDB Public

    FamDB file format library and utilities

    Dfam-consortium/FamDB’s past year of commit activity
    Python 16 1 1 0 Updated Sep 3, 2024
  • Dfam-API Public

    Dfam API server

    Dfam-consortium/Dfam-API’s past year of commit activity
    JavaScript 1 CC0-1.0 0 0 0 Updated Aug 13, 2024
  • tss_prefilter Public

    Tensor Slide Sketch Alignment Prefilter

    Dfam-consortium/tss_prefilter’s past year of commit activity
    Rust 0 0 0 0 Updated Jul 23, 2024
  • TETools Public

    Dfam Transposable Element Tools Docker container.

    Dfam-consortium/TETools’s past year of commit activity
    Perl 82 CC0-1.0 17 4 0 Updated Apr 10, 2024
  • RepeatModeler Public

    De-Novo Repeat Discovery Tool

    Dfam-consortium/RepeatModeler’s past year of commit activity
    Perl 184 23 100 1 Updated Mar 22, 2024
  • Dfam-Portal Public

    Angular website for Dfam resource

    Dfam-consortium/Dfam-Portal’s past year of commit activity
    TypeScript 1 CC0-1.0 1 0 0 Updated Mar 13, 2024
  • RepeatMasker_Nextflow Public

    Nextflow script for running RepeatMasker on a cluster

    Dfam-consortium/RepeatMasker_Nextflow’s past year of commit activity
    Perl 4 0 2 0 Updated Mar 11, 2024
  • polyA Public Forked from TravisWheelerLab/polyA

    Automatically Adjudicate Any And All Arbitrary Annotations, Astutely Adjoin Abutting Alignments, And Also Amputate Anything Amiss (AAAAAAAAAAAAAAAA)

    Dfam-consortium/polyA’s past year of commit activity
    Python 0 BSD-3-Clause 2 0 0 Updated Dec 9, 2022
  • RepeatAfterMe Public

    A package for the extension of repetitive DNA sequences

    Dfam-consortium/RepeatAfterMe’s past year of commit activity
    C 0 CC0-1.0 0 1 0 Updated Sep 13, 2022
  • dfam-boilerplate Public

    Boilerplate, templates and standards for various languages and platforms utilized by Dfam

    Dfam-consortium/dfam-boilerplate’s past year of commit activity
    Python 0 0 0 0 Updated Aug 30, 2022
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