pyproject dependency fix (#607)

dev-requirements.txt

@@ -1,10 +1,10 @@
 accessible-pygments==0.0.5
 aioca==1.7
 aiofiles==24.1.0
-aiohappyeyeballs==2.3.5
-aiohttp==3.10.3
+aiohappyeyeballs==2.4.0
+aiohttp==3.10.5
 aiosignal==1.3.1
-alabaster==0.7.16
+alabaster==1.0.0
 annotated-types==0.7.0
 anyio==4.4.0
 appdirs==1.4.4
@@ -14,48 +14,43 @@ attrs==24.2.0
 babel==2.16.0
 beautifulsoup4==4.12.3
 bidict==0.23.1
-black==24.8.0
 bluesky==1.13.0a4
 bluesky-kafka==0.10.0
 bluesky-live==0.0.8
 boltons==24.0.0
-cachetools==5.4.0
+cachetools==5.5.0
 caproto==1.1.1
 certifi==2024.7.4
 cfgv==3.4.0
-chardet==5.2.0
 charset-normalizer==3.3.2
 click==8.1.7
 cloudpickle==3.0.0
 colorama==0.4.6
 colorlog==6.8.2
 comm==0.2.2
 confluent-kafka==2.5.0
-contourpy==1.2.1
+contourpy==1.3.0
 copier==9.3.1
 coverage==7.6.1
 cycler==0.12.1
-dask==2024.8.0
+dask==2024.8.1
 databroker==1.2.5
 dataclasses-json==0.6.7
 decorator==5.1.1
 deepmerge==1.1.1
-diff_cover==9.1.1
 distlib==0.3.8
 dls-bluesky-core==0.0.4
-dls-dodal==1.28.0
+dls-dodal==1.29.4
 dnspython==2.6.1
 docopt==0.6.2
 doct==1.1.0
 docutils==0.21.2
 dunamai==1.22.0
-email_validator==2.2.0
 entrypoints==0.4
 epicscorelibs==7.0.7.99.0.2
 event-model==1.20.0
 executing==2.0.1
-fastapi==0.112.0
-fastapi-cli==0.0.5
+fastapi==0.112.2
 fasteners==0.19
 filelock==3.15.4
 flexcache==0.3
@@ -72,32 +67,30 @@ h5py==3.11.0
 HeapDict==1.0.1
 historydict==1.2.6
 httpcore==1.0.5
-httptools==0.6.1
-httpx==0.27.0
+httpx==0.27.2
 humanize==4.10.0
 identify==2.6.0
-idna==3.7
-imageio==2.34.2
+idna==3.8
+imageio==2.35.1
 imagesize==1.4.1
-importlib_metadata==8.2.0
-importlib_resources==6.4.0
+importlib_metadata==8.4.0
+importlib_resources==6.4.4
 iniconfig==2.0.0
 intake==0.6.4
 ipython==8.18.0
-ipywidgets==8.1.3
-itsdangerous==2.2.0
+ipywidgets==8.1.5
 jedi==0.19.1
 Jinja2==3.1.4
 jinja2-ansible-filters==1.3.2
 jsonschema==4.23.0
 jsonschema-specifications==2023.12.1
-jupyterlab_widgets==3.0.11
+jupyterlab_widgets==3.0.13
 kiwisolver==1.4.5
 ldap3==2.9.1
 locket==1.0.0
 markdown-it-py==3.0.0
 MarkupSafe==2.1.5
-marshmallow==3.21.3
+marshmallow==3.22.0
 matplotlib==3.9.2
 matplotlib-inline==0.1.7
 mdit-py-plugins==0.4.1
@@ -108,18 +101,18 @@ mongoquery==1.4.2
 msgpack==1.0.8
 msgpack-numpy==0.4.8
 multidict==6.0.5
-mypy==1.11.1
+mypy==1.11.2
 mypy-extensions==1.0.0
 myst-parser==4.0.0
 networkx==3.3
 nodeenv==1.9.1
 nose2==0.15.1
 nslsii==0.10.3
 numcodecs==0.13.0
-numpy==2.0.1
+numpy==1.26.4
 opencv-python-headless==4.10.0.84
 ophyd==1.9.0
-ophyd-async==0.3.1
+ophyd-async==0.3.4
 orjson==3.10.7
 p4p==4.1.12
 packaging==24.1
@@ -150,23 +143,19 @@ py==1.11.0
 pyasn1==0.6.0
 pycryptodome==3.20.0
 pydantic==2.8.2
-pydantic-extra-types==2.9.0
 pydantic-settings==2.4.0
 pydantic_core==2.20.1
 pydata-sphinx-theme==0.15.4
-pyepics==3.5.6
+pyepics==3.5.7
 Pygments==2.18.0
 pymongo==4.8.0
 pyOlog==4.5.0
-pyparsing==3.1.2
-pyright==1.1.375
+pyparsing==3.1.4
 pytest==8.3.2
-pytest-asyncio==0.23.8
+pytest-asyncio==0.24.0
 pytest-cov==5.0.0
-pytest-random-order==1.1.1
 python-dateutil==2.9.0.post0
 python-dotenv==1.0.1
-python-multipart==0.0.9
 pytz==2024.1
 PyYAML==6.0.2
 questionary==2.0.1
@@ -175,21 +164,18 @@ redis-json-dict==0.2.0
 referencing==0.35.1
 requests==2.32.3
 responses==0.25.3
-rich==13.7.1
 rpds-py==0.20.0
-ruff==0.5.7
-scanspec==0.7.1
-setuptools-dso==2.11a2
-shellingham==1.5.4
+ruff==0.6.2
+scanspec==0.7.2
+setuptools-dso==2.11
 six==1.16.0
 slicerator==1.1.0
 smmap==5.0.1
 sniffio==1.3.1
 snowballstemmer==2.2.0
-soupsieve==2.5
-Sphinx==7.4.5
+soupsieve==2.6
+Sphinx==8.0.2
 sphinx-autobuild==2024.4.16
-sphinx-autodoc-typehints==2.2.3
 sphinx-click==6.0.0
 sphinx-copybutton==0.5.2
 sphinx_design==0.6.1
@@ -199,25 +185,22 @@ sphinxcontrib-devhelp==2.0.0
 sphinxcontrib-htmlhelp==2.1.0
 sphinxcontrib-httpdomain==1.8.1
 sphinxcontrib-jsmath==1.0.1
-sphinxcontrib-mermaid==0.9.2
 sphinxcontrib-openapi==0.8.4
 sphinxcontrib-qthelp==2.0.0
 sphinxcontrib-serializinghtml==2.0.0
 stack-data==0.6.3
-starlette==0.37.2
+starlette==0.38.2
 stomp-py==8.1.2
 suitcase-mongo==0.6.0
 suitcase-msgpack==0.3.0
 suitcase-utils==0.5.4
 super-state-machine==2.0.2
-tifffile==2024.8.10
+tifffile==2024.8.28
 toolz==0.12.1
 tox==3.28.0
 tox-direct==0.4
 tqdm==4.66.5
 traitlets==5.14.3
-typer==0.12.3
-types-aiofiles==24.1.0.20240626
 types-mock==5.1.0.20240425
 types-PyYAML==6.0.12.20240808
 types-requests==2.32.0.20240712
@@ -226,20 +209,18 @@ typing-inspect==0.9.0
 typing_extensions==4.12.2
 tzdata==2024.1
 tzlocal==5.2
-ujson==5.10.0
 urllib3==2.2.2
-uvicorn==0.30.5
-uvloop==0.19.0
+uvicorn==0.30.6
 virtualenv==20.26.3
 watchfiles==0.23.0
 wcwidth==0.2.13
 websocket-client==1.8.0
-websockets==12.0
-widgetsnbextension==4.0.11
+websockets==13.0
+widgetsnbextension==4.0.13
 workflows==2.27
 xarray==2024.7.0
 yarl==1.9.4
 zarr==2.18.2
 zict==2.2.0
-zipp==3.20.0
-zocalo==1.0.0
+zipp==3.20.1
+zocalo==1.1.0

pyproject.toml

@@ -18,13 +18,13 @@ dependencies = [
  "pyepics",
  "aioca",
  "pydantic>=2.0",
- "scanspec>=0.7.1",
+ "scanspec>=0.7.2",
  "pydantic-settings",
  "stomp-py",
  "aiohttp",
- "PyYAML",
+ "PyYAML>=6.0.2",
  "click",
- "fastapi[all]",
+ "fastapi>=0.112.0",
  "uvicorn",
  "requests",
  "dls-bluesky-core", #requires ophyd-async
@@ -40,16 +40,16 @@ requires-python = ">=3.10"
 [project.optional-dependencies]
 dev = [
  "copier",
- "myst-parser",
+ "myst-parser>=4.0.0",
  "pipdeptree",
- "pre-commit",
- "pydata-sphinx-theme>=0.12",
+ "pre-commit>=3.8.0",
+ "pydata-sphinx-theme>=0.15.4",
  "mypy",
  "pytest-cov",
  "pytest-asyncio",
  "responses",
  "ruff",
- "sphinx-autobuild",
+ "sphinx-autobuild>=2024.4.16",
  "sphinx-copybutton",
  "sphinx-click",
  "sphinx-design",