Skip to content

A Python package to interact with fasting logs from apps like Zero.

License

Notifications You must be signed in to change notification settings

DigitalBiomarkerDiscoveryPipeline/fasting

 
 

Repository files navigation

FASTING

image image image image image

A Python package to interact with fasting logs from apps like Zero.

Background & Motivation

Fasting

Fasting is a technique used to improve metabolic health, reduce inflammation, rebalance gut health, lose weight, increase longevity, improve mental clarity and focus. There's various forms of fasting, with Intermittent Fasting (IF) likely being the most common. You can read about IF and other types of fasting on the Zero blog. During extended periods of fasting, our bodies "flip a metabolic switch" from burning glucose to burning fatty acids and ketones.

The metabolic switch typically takes place in a later phase of fasting, when the glycogen stores contained in the liver are depleted and adipose tissue (fat) begins to increase fatty acids and glycerol. While the switch generally occurs between 12 and 36 hours after stopping eating, it can depend upon the total liver glycogen content when the person started the fast, as well as the person’s energy expenditures during the fast.

Josh Clemente, a Levels co-founder, has shared the benefits of IF on his metabolic fitness on the Levels blog.

During periods of extended fasts, Josh's average glucose gently trends down into the optimal range and remains there with only 2-3% variation for days at a time.

Digital Biomarker Pipeline

This package is part of the Digital Biomarker Discovery Pipeline (DBDP).

DBDP

You can read more about the DBDP here. If you track your fasts, there's a chance you also track biomarkers with wearables and other hardware in the modern health stack. The goal of this package is to enable you to utilize your data for your own purpose, like cross analyzing fasting performance with other biomarkers.

Original Use Case

Functionality around fasting logs was originally built for the Metabolic Health Analysis app.

Metabolic Health Analysis

Part of the app's software was pulled out and enhanced to create this stand-alone FASTING package. Checkout the app repo and the DBDP for ideas and use cases around your own biomarker analysis.

Usage and Features

This section provides a quick preview of some of the package features. Check out the full API documentation and getting started tutorial for more information.

Installation

This package is supported by Python 3.7+.

pip install fasting

Standardize Log Format

Export format from Zero:

Date Start End Hours Night Eating
1/17/21 19:15 12:00 16 1
1/16/21 19:45 10:14 14 2
1/15/21 21:00 10:00 13 3

Discrete Logs:

discrete_logs = fasting.quantify.zero_fasts(zero_export.csv)
fast start_dt end_dt
0 2021-01-14 19:00:00 2021-01-15 11:22:00
1 2021-01-15 21:00:00 2021-01-16 10:00:00
2 2021-01-16 19:45:00 2021-01-17 10:14:00

Continuous Log:

continuous_log = fasting.quantify.continuous_fasts(discrete_logs)
datetime fasting status
2021-01-14 19:00:00 1
2021-01-14 19:01:00 1
2021-01-14 19:02:00 1

Fasting Metrics

cumulative_hours = quantify.daily_cumulative_hours(continuous_log)
max_consecutive_hours = quantify.daily_max_consecutive_hours(continuous_log)

Metrics

Fasting Resources

Blogs and Apps

Studies

Impact of time restricted feeding (TRF) on metabolic health

  • Two groups
    • Group 1: 6 hour feeding window (8am-2pm), TRF group
    • Group 2: 12 hour feeding window (8am-8pm), control group
  • Overweight, non-diabetic individuals

Result / Findings:

  • Engaging in time restricted feeding for just 4 days can lower fasting glucose, fasting insulin, and mean glucose levels significantly
  • TRF group demonstrated lower post meal glucose spikes, despite eating the same meals

Relationship between time of day of eating and metabolic health

Result / Findings: Eating food later in the evening will cause significant increase in insulin and glucose levels compared to eating the same meal in the morning

Impact of IF on controlling type 2 diabetes

  • 3 participants with type 2 diabetes
  • 24 hour fasts 3-4 days per week

Result / Findings:

  • All participants meaningfully reversed diabetes in as little as 7 months
  • One participant regained enough insulin sensitivity to get off high doses of insulin medication within 3 weeks

Credits

This package was created with Cookiecutter and the giswqs/pypackage project template.

About

A Python package to interact with fasting logs from apps like Zero.

Topics

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages

  • Python 100.0%