Skip to content

Commit

Permalink
fix: Increase mem and time constraints for validation (#315)
Browse files Browse the repository at this point in the history
  • Loading branch information
karatugo authored Apr 15, 2024
1 parent d5646e8 commit 608c115
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions workflows/process_submission.nf
Original file line number Diff line number Diff line change
Expand Up @@ -36,8 +36,8 @@ process get_submitted_files {
queue 'datamover'
containerOptions "--bind $params.storePath"
containerOptions "--bind $params.depo_data"
memory { 2.GB }
time { 2.hour * task.attempt }
memory { 4.GB }
time { 4.hour * task.attempt }
maxRetries 5
errorStrategy { task.exitStatus in 130..255 ? 'retry' : 'terminate' }

Expand All @@ -57,8 +57,8 @@ process validate_study {

queue 'short'
containerOptions "--bind $params.storePath"
memory { 4.GB * task.attempt }
time { 2.hour * task.attempt }
memory { 8.GB * task.attempt }
time { 4.hour * task.attempt }
maxRetries 5
errorStrategy { task.exitStatus in 130..255 ? 'retry' : 'terminate' }

Expand Down

0 comments on commit 608c115

Please sign in to comment.