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Error: duplicated variant #214

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sigven opened this issue Nov 30, 2021 · 0 comments
Open

Error: duplicated variant #214

sigven opened this issue Nov 30, 2021 · 0 comments

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@sigven
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sigven commented Nov 30, 2021

Hi,

cc @danielvo

I just ran a small VCF file (attached) with vcf-validator (v.0.9.4). Although the warnings are fully understandable, cases of duplicated variants are reported, and I am struggling to see how my variants should be re-formatted to pass the validation? Could you provide any input on this matter?

sample_VCF.vcf.errors_summary.1638271851477.txt
sample_VCF.txt

Any help much appreciated,

kind regards,
Sigve

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