[WIP] CI: handle required workflows when skipped

.github/workflows/clang_sanitizers.yml

@@ -5,26 +5,42 @@ on:
     branches:
       - "development"
   pull_request:
-    paths-ignore:
-      - "Docs/**"
 
 concurrency:
   group: ${{ github.ref }}-${{ github.head_ref }}-clangsanitizers
   cancel-in-progress: true
 
 jobs:
+  skip_checks:
+    name: Analyze PR
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+      - name: Skip checks?
+        run: |
+          .github/workflows/scripts/check_diff.sh     \
+            ${{ github.event.pull_request.head.ref }} \
+            ${{ github.event.pull_request.base.ref }} \
+            ${{ github.event.pull_request.head.repo.clone_url }}
+    outputs:
+      skip: ${{ env.SKIP_CHECKS }}
   build_UB_sanitizer:
     name: Clang UB sanitizer
     runs-on: ubuntu-24.04
-    if: github.event.pull_request.draft == false
+    needs: skip_checks
+    if: ${{ github.event.pull_request.draft == false && needs.skip_checks.outputs.skip == 'false' }}
     env:
       CC: clang
       CXX: clang++
       # On CI for this test, Ninja is slower than the default:
       #CMAKE_GENERATOR: Ninja
     steps:
-    - uses: actions/checkout@v4
-    - name: install dependencies
+    - name: Checkout code
+      uses: actions/checkout@v4
+    - name: Install dependencies
       run: |
         .github/workflows/dependencies/clang17.sh
     - name: CCache Cache
@@ -34,17 +50,15 @@ jobs:
         key: ccache-${{ github.workflow }}-${{ github.job }}-git-${{ github.sha }}
         restore-keys: |
              ccache-${{ github.workflow }}-${{ github.job }}-git-
-    - name: build WarpX
+    - name: Build WarpX
       run: |
         export CCACHE_COMPRESS=1
         export CCACHE_COMPRESSLEVEL=10
         export CCACHE_MAXSIZE=100M
         ccache -z
-
         export CXX=$(which clang++-17)
         export CC=$(which clang-17)
         export CXXFLAGS="-fsanitize=undefined,address,pointer-compare -fno-sanitize-recover=all"
-
         cmake -S . -B build                 \
           -GNinja                           \
           -DCMAKE_VERBOSE_MAKEFILE=ON       \
@@ -57,36 +71,32 @@ jobs:
           -DWarpX_PRECISION=SINGLE          \
           -DWarpX_PARTICLE_PRECISION=SINGLE
         cmake --build build -j 4
-
         ccache -s
         du -hs ~/.cache/ccache
-
-    - name: run with UB sanitizer
+    - name: Run with UB sanitizer
       run: |
-
         export OMP_NUM_THREADS=2
-
         #MPI implementations often leak memory
         export "ASAN_OPTIONS=detect_leaks=0"
-
         mpirun -n 2 ./build/bin/warpx.rz Examples/Physics_applications/laser_acceleration/inputs_base_rz
         mpirun -n 2 ./build/bin/warpx.1d Examples/Physics_applications/laser_acceleration/inputs_base_1d
         mpirun -n 2 ./build/bin/warpx.2d Examples/Physics_applications/laser_acceleration/inputs_base_2d
         mpirun -n 2 ./build/bin/warpx.3d Examples/Physics_applications/laser_acceleration/inputs_base_3d
-
   build_thread_sanitizer:
     name: Clang thread sanitizer
     runs-on: ubuntu-24.04
     # TODO Fix data race conditions and re-enable job
-    if: 0 #github.event.pull_request.draft == false
+    needs: skip_checks
+    if: 0 #${{ github.event.pull_request.draft == false && needs.skip_checks.outputs.skip == 'false' }}
     env:
       CC: clang
       CXX: clang++
       # On CI for this test, Ninja is slower than the default:
       #CMAKE_GENERATOR: Ninja
     steps:
-    - uses: actions/checkout@v4
-    - name: install dependencies
+    - name: Checkout code
+      uses: actions/checkout@v4
+    - name: Install dependencies
       run: |
         .github/workflows/dependencies/clang17.sh
     - name: CCache Cache
@@ -96,17 +106,15 @@ jobs:
         key: ccache-${{ github.workflow }}-${{ github.job }}-git-${{ github.sha }}
         restore-keys: |
              ccache-${{ github.workflow }}-${{ github.job }}-git-
-    - name: build WarpX
+    - name: Build WarpX
       run: |
         export CCACHE_COMPRESS=1
         export CCACHE_COMPRESSLEVEL=10
         export CCACHE_MAXSIZE=100M
         ccache -z
-
         export CXX=$(which clang++-17)
         export CC=$(which clang-17)
         export CXXFLAGS="-fsanitize=thread"
-
         cmake -S . -B build                 \
           -GNinja                           \
           -DCMAKE_VERBOSE_MAKEFILE=ON       \
@@ -120,7 +128,6 @@ jobs:
           -DWarpX_PRECISION=DOUBLE          \
           -DWarpX_PARTICLE_PRECISION=DOUBLE
         cmake --build build -j 4
-
         cmake -S . -B build_EB              \
           -GNinja                           \
           -DCMAKE_VERBOSE_MAKEFILE=ON       \
@@ -134,26 +141,19 @@ jobs:
           -DWarpX_PRECISION=DOUBLE          \
           -DWarpX_PARTICLE_PRECISION=DOUBLE
         cmake --build build_EB -j 4
-
         ccache -s
         du -hs ~/.cache/ccache
-
-    - name: run with thread sanitizer
+    - name: Run with thread sanitizer
       run: |
         export PMIX_MCA_gds=hash
         export TSAN_OPTIONS='ignore_noninstrumented_modules=1'
         export ARCHER_OPTIONS="verbose=1"
-
         export OMP_NUM_THREADS=2
-
         mpirun -n 2 ./build/bin/warpx.rz Examples/Physics_applications/laser_acceleration/inputs_base_rz warpx.serialize_initial_conditions = 0
         mpirun -n 2 ./build/bin/warpx.1d Examples/Physics_applications/laser_acceleration/inputs_base_1d warpx.serialize_initial_conditions = 0
         mpirun -n 2 ./build/bin/warpx.2d Examples/Physics_applications/laser_acceleration/inputs_base_2d warpx.serialize_initial_conditions = 0
         mpirun -n 2 ./build/bin/warpx.3d Examples/Physics_applications/laser_acceleration/inputs_base_3d warpx.serialize_initial_conditions = 0
-
         git clone https://github.com/ECP-WarpX/warpx-data ../warpx-data
         cd Examples/Tests/embedded_circle
-
         ulimit -c unlimited
-
         mpirun -n 2 ../../../build_EB/bin/warpx.2d inputs_test_2d_embedded_circle warpx.serialize_initial_conditions = 0

.github/workflows/clang_tidy.yml

@@ -5,64 +5,79 @@ on:
     branches:
       - "development"
   pull_request:
-    paths-ignore:
-      - "Docs/**"
 
 concurrency:
   group: ${{ github.ref }}-${{ github.head_ref }}-clangtidy
   cancel-in-progress: true
 
 jobs:
+  skip_checks:
+    name: Analyze PR
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+      - name: Skip checks?
+        run: |
+          .github/workflows/scripts/check_diff.sh     \
+            ${{ github.event.pull_request.head.ref }} \
+            ${{ github.event.pull_request.base.ref }} \
+            ${{ github.event.pull_request.head.repo.clone_url }}
+    outputs:
+      skip: ${{ env.SKIP_CHECKS }}
   run_clang_tidy:
     strategy:
       matrix:
         dim: [1, 2, RZ, 3]
     name: clang-tidy-${{ matrix.dim }}D
     runs-on: ubuntu-22.04
     timeout-minutes: 180
-    if: github.event.pull_request.draft == false
+    needs: skip_checks
+    if: ${{ github.event.pull_request.draft == false }}
     steps:
-    - uses: actions/checkout@v4
-    - name: install dependencies
+    - name: Checkout code
+      if: ${{ needs.skip_checks.outputs.skip == 'false' }}
+      uses: actions/checkout@v4
+    - name: Install dependencies
+      if: ${{ needs.skip_checks.outputs.skip == 'false' }}
       run: |
         .github/workflows/dependencies/clang15.sh
-    - name: set up cache
+    - name: Set up cache
+      if: ${{ needs.skip_checks.outputs.skip == 'false' }}
       uses: actions/cache@v4
       with:
         path: ~/.cache/ccache
         key: ccache-${{ github.workflow }}-${{ github.job }}-git-${{ github.sha }}
         restore-keys: |
              ccache-${{ github.workflow }}-${{ github.job }}-git-
-    - name: build WarpX & run clang-tidy
+    - name: Build WarpX & run clang-tidy
+      if: ${{ needs.skip_checks.outputs.skip == 'false' }}
       run: |
         export CCACHE_COMPRESS=1
         export CCACHE_COMPRESSLEVEL=10
         export CCACHE_MAXSIZE=300M
         export CCACHE_EXTRAFILES=${{ github.workspace }}/.clang-tidy
         export CCACHE_LOGFILE=${{ github.workspace }}/ccache.log.txt
         ccache -z
-
         export CXX=$(which clang++-15)
         export CC=$(which clang-15)
-
-        cmake -S . -B build_clang_tidy      \
-          -DCMAKE_VERBOSE_MAKEFILE=ON       \
-          -DWarpX_DIMS="${{ matrix.dim }}"  \
-          -DWarpX_MPI=ON                    \
-          -DWarpX_COMPUTE=OMP               \
-          -DWarpX_FFT=ON                    \
-          -DWarpX_QED=ON                    \
-          -DWarpX_QED_TABLE_GEN=ON          \
-          -DWarpX_OPENPMD=ON                \
-          -DWarpX_PRECISION=SINGLE          \
+        cmake -S . -B build_clang_tidy     \
+          -DCMAKE_VERBOSE_MAKEFILE=ON      \
+          -DWarpX_DIMS="${{ matrix.dim }}" \
+          -DWarpX_MPI=ON                   \
+          -DWarpX_COMPUTE=OMP              \
+          -DWarpX_FFT=ON                   \
+          -DWarpX_QED=ON                   \
+          -DWarpX_QED_TABLE_GEN=ON         \
+          -DWarpX_OPENPMD=ON               \
+          -DWarpX_PRECISION=SINGLE         \
           -DCMAKE_CXX_COMPILER_LAUNCHER=ccache
-
         cmake --build build_clang_tidy -j 4
-
         ${{github.workspace}}/.github/workflows/source/makeMakefileForClangTidy.py --input ${{github.workspace}}/ccache.log.txt
         make -j4 --keep-going -f clang-tidy-ccache-misses.mak \
             CLANG_TIDY=clang-tidy-15 \
             CLANG_TIDY_ARGS="--config-file=${{github.workspace}}/.clang-tidy --warnings-as-errors=*"
-
         ccache -s
         du -hs ~/.cache/ccache

.github/workflows/codeql.yml

@@ -13,41 +13,52 @@ concurrency:
   cancel-in-progress: true
 
 jobs:
+  skip_checks:
+    name: Analyze PR
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+      - name: Skip checks?
+        run: |
+          .github/workflows/scripts/check_diff.sh     \
+            ${{ github.event.pull_request.head.ref }} \
+            ${{ github.event.pull_request.base.ref }} \
+            ${{ github.event.pull_request.head.repo.clone_url }}
+    outputs:
+      skip: ${{ env.SKIP_CHECKS }}
   analyze:
-    name: Analyze
+    name: Query code
     runs-on: ubuntu-latest
-    if: github.event.pull_request.draft == false
+    needs: skip_checks
+    if: ${{ github.event.pull_request.draft == false && needs.skip_checks.outputs.skip == 'false' }}
     permissions:
       actions: read
       contents: read
       security-events: write
-
     strategy:
       fail-fast: false
       matrix:
         language: [ python, cpp ]
-
     steps:
-      - name: Checkout
+      - name: Checkout code
         uses: actions/checkout@v4
-
-      - uses: actions/setup-python@v5
-        name: Install Python
+      - name: Install Python
+        uses: actions/setup-python@v5
         with:
           python-version: '3.x'
-
       - name: Install Packages (C++)
         if: ${{ matrix.language == 'cpp' }}
         run: |
           sudo apt-get update
           sudo apt-get install --yes cmake openmpi-bin libopenmpi-dev libhdf5-openmpi-dev libadios-openmpi-dev ccache
-
           python -m pip install --upgrade pip
           python -m pip install --upgrade pipx
           python -m pip install --upgrade wheel
           python -m pip install --upgrade cmake
           python -m pipx install cmake
-
       - name: Set Up Cache
         if: ${{ matrix.language == 'cpp' }}
         uses: actions/cache@v4
@@ -56,48 +67,39 @@ jobs:
           key: ccache-${{ github.workflow }}-${{ github.job }}-git-${{ github.sha }}
           restore-keys: |
                ccache-${{ github.workflow }}-${{ github.job }}-git-
-
       - name: Configure (C++)
         if: ${{ matrix.language == 'cpp' }}
         run: |
           cmake -S . -B build -DWarpX_OPENPMD=ON
-
       - name: Initialize CodeQL
         uses: github/codeql-action/init@v3
         with:
           config-file: ./.github/codeql/warpx-codeql.yml
           languages: ${{ matrix.language }}
           queries: +security-and-quality
-
       - name: Build (py)
-        uses: github/codeql-action/autobuild@v3
         if: ${{ matrix.language == 'python' }}
-
+        uses: github/codeql-action/autobuild@v3
       - name: Build (C++)
         if: ${{ matrix.language == 'cpp' }}
         run: |
           export CCACHE_COMPRESS=1
           export CCACHE_COMPRESSLEVEL=10
           export CCACHE_MAXSIZE=100M
           ccache -z
-
           cmake --build build -j 4
-
           ccache -s
           du -hs ~/.cache/ccache
-
           # Make sure CodeQL has something to do
           touch Source/Utils/WarpXVersion.cpp
           export CCACHE_DISABLE=1
           cmake --build build -j 4
-
       - name: Perform CodeQL Analysis
         uses: github/codeql-action/analyze@v3
         with:
           category: "/language:${{ matrix.language }}"
           upload: False
           output: sarif-results
-
       - name: filter-sarif
         uses: advanced-security/filter-sarif@v1
         with:
@@ -111,7 +113,6 @@ jobs:
             -build/_deps/*/*/*/*/*/*/*/*
           input: sarif-results/${{ matrix.language }}.sarif
           output: sarif-results/${{ matrix.language }}.sarif
-
       - name: Upload SARIF
         uses: github/codeql-action/upload-sarif@v3
         with: