product created by Peter M.J. Herman

EMODnet-Biology-Phytoplankton-community-analysis-Middle-Adriatic

A workflow and application written in R (Shiny), that gives a multivariate representation of phytoplankton community in the Middle Adriatic.

This is the Github repository of the EMODnet Biology product described here:

http://emodnet-biology.eu/phytoplankton-community-analysis-northern-adriatic

Data Series

We used the phytoplankton dataset Phytoplankton composition and primary production from 2002 to 2015 in the Adriatic Sea, which can be retrieved from the EMODNET Biology download toolbox:

http://www.emodnet-biology.eu/toolbox/en/download/occurrence/dataset/5718.

The phytoplankton series is described in Skejic et al. (2015).

Full description with methodology and code of this analysis:

pdf: https://github.com/EMODnet/EMODnet-Biology-Phytoplankton-community-analysis-Middle-Adriatic/blob/master/PhytoNA.pdf

html:https://github.com/EMODnet/EMODnet-Biology-Phytoplankton-community-analysis-Middle-Adriatic/blob/master/PhytoNA.html

R markdown: https://github.com/EMODnet/EMODnet-Biology-Phytoplankton-community-analysis-Middle-Adriatic/blob/master/PhytoNA.Rmd