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11 Open 264 Closed
11 Open 264 Closed
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Issues list

dropping columns that have only one sequence in it can fail at the N-terminus.
#331 opened Aug 9, 2024 by danielhhaft
1
clarification: why is phmmer/jackhmmer better than blastp/psi-blast?
#327 opened Jul 14, 2024 by JLSteenwyk
Extracting sequences from nhmmer --tblout
#325 opened May 3, 2024 by Euphrasiologist
2
Feature request: Limit the MSA depth in Jackhmmer/Nhmmer/Phmmer/Hmmsearch
#323 opened Apr 10, 2024 by Augustin-Zidek
14
Parameters for building HMMs
#316 opened Dec 4, 2023 by sanyalab
2
Filter results of hmmsearch
#315 opened Nov 14, 2023 by davidecrs
Error: ���� when running in docker
#239 opened Apr 26, 2021 by multimeric
9
Very long gap in an alignment, due to extreme mononlucleotide repeat in profile H4 In HMMER4 development wontfix
#201 opened Jul 23, 2020 by traviswheeler
@cryptogenomicon
4
H4 Daemon uses hack to detect type of data file H4 In HMMER4 development
#122 opened Jan 26, 2017 by npcarter
@npcarter
HMMER can't read data files that were written on a machine of opposite endianness H4 In HMMER4 development
#121 opened Jan 26, 2017 by npcarter
HMMER4 doesn't handle POWER architecture when booted in big-endian mode H4 In HMMER4 development
#120 opened Jan 26, 2017 by npcarter
4
ProTip! Exclude everything labeled bug with -label:bug.