build

Check for identical sequences and names #12

	name: build

	on: [push, workflow_dispatch]

	jobs:
	build:
	runs-on: ubuntu-22.04

	steps:
	- uses: actions/checkout@v2
	- name: Set up Python 3.9
	uses: actions/setup-python@v2
	with:
	python-version: '3.9'
	- name: Install dependencies
	# Install dependencies for WeasyPrint (pdf_reports): https://doc.courtbouillon.org/weasyprint/stable/first_steps.html#ubuntu-20-04
	run: \|
	python -m pip install --upgrade pip
	sudo apt-get -y install python3-cffi python3-brotli libpango-1.0-0 libharfbuzz0b libpangoft2-1.0-0
	pip install pytest pytest-cov coveralls
	pip install pypdf libsass
	- name: Test pip installation
	run: \|
	pip install -e .
	- name: Test with pytest
	run: \|
	python -m pytest --cov=seqreport
	# - name: Coveralls
	# run: coveralls
	# env:
	# GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	# COVERALLS_SERVICE_NAME: github

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