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@caherzee caherzee released this 05 Oct 14:42
· 103 commits to master since this release
v3.01
96d927f

elPrep binaries compiled with Go 1.9.

Added two new filters:
--filter-non-exact-mapping-reads
--filter-non-exact-mapping-reads-strict
for removing all reads where the mapping is not an exact match with the reference, based on the cigar string or optional tags, see documentation.

Fixed minor bug:
-mark-duplicates filter no longer requires adding read groups to execute

Added API documentation in the source code.

Many thanks to Leonor Palmeira for bug reports.

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