SPDI normalization with refseq files #73
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: CI/CD | |
on: | |
push: | |
branches: [main] | |
pull_request: | |
branches: [main, dev] | |
workflow_dispatch: | |
jobs: | |
test: | |
name: Test | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Install pip | |
run: python -m pip install --upgrade pip | |
- name: Install Dependencies | |
run: pip install -r requirements.txt | |
- name: Lint with flake8 | |
uses: py-actions/flake8@v2 | |
with: | |
args: --extend-ignore E501,E741 | |
- name: Run Tests | |
run: ./fetch_utilities_data.sh && python -m pytest | |
deploy: | |
name: Deploy to dev | |
runs-on: ubuntu-latest | |
if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/main' && always() && contains(join(needs.*.result, ','), 'success') }} | |
needs: [test] | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: akhileshns/heroku-deploy@v3.12.14 | |
with: | |
heroku_api_key: ${{ secrets.HEROKU_API_KEY }} | |
heroku_app_name: ${{ secrets.HEROKU_DEV_APP_NAME }} | |
heroku_email: ${{ secrets.HEROKU_EMAIL }} |