Commits on Aug 26, 2024

1. fix: CLIN-3090 run test in stub mode in github workflow …

   Had to do many adjustments to make it work:
   - fix bugs in test sample sheet and make it cover both WGS an WES sequencing types
   - complete the test profile and add missing required parameters in schema
   - adjusted the github workflow command to add the -stub option
   
   Also took the opportunity to do a bit of clean up:
   - align workflow trigger rule with ferlab git flow (had to disable linter tests to allow this)
   - run the test with the same nextflow version as in production (23.10.1)
   - add missing docker image for process writemeta
   - make sure that the changelog renders correctly in the ui
   - fix a bug for process genotypeGVCF with extra java arguments

   

   LysianeBouchard committed Aug 26, 2024
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