Merge pull request #29 from FertigLab/updateBranch

Fixed bug with patternMarker heatmap
FertigLab · Mar 3, 2020 · acedc41 · acedc41
2 parents 65d628f + cc3dd57
commit acedc41
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/R/heatmap_pattern_marker_regions.R b/R/heatmap_pattern_marker_regions.R
@@ -108,12 +108,14 @@ heatmapPatternMarkers = function(cgaps_result, atac_data, celltypes, numregions
 
  if(order == TRUE) {
  gplots::heatmap.2(allPatSubset, density.info="none", trace="none",
- dendrogram='none', Rowv=FALSE, Colv=FALSE, ColSideColors = colColors,
+ dendrogram='none', Rowv=FALSE, Colv=FALSE,
+ ColSideColors = colColors, RowSideColors = rowCols,
  labRow = NA, labCol = as.character(sort(celltypes)), ...)
  }
  else {
  gplots::heatmap.2(allPatSubset, density.info="none", trace="none",
- dendrogram='none', Rowv=FALSE, Colv=FALSE, ColSideColors = colColors,
+ dendrogram='none', Rowv=FALSE, Colv=FALSE,
+ ColSideColors = colColors, RowSideColors = rowCols,
  labRow = NA, labCol = as.character(celltypes), ...)
  }
 }