Merge pull request #310 from FormingWorlds/ls/proteus-to-pypi

ls/proteus to pypi

CITATION.cff

@@ -32,7 +32,7 @@ authors:
   orcid: "https://orcid.org/0000-0002-0673-4860"
 
 title: "PROTEUS"
-version: 24.10.30
+version: 24.12.11
 doi: 10.xx/xx.xx
 date-released: 2024-10-30
 url: "https://github.com/FormingWorlds/PROTEUS"

CONTRIBUTING.md

@@ -100,7 +100,7 @@ The versioning scheme we use is [CalVer](https://calver.org/).
 0. Update requirements files:
 
 ```console
-python tools/requirements_txt.py
+python tools/generate_requirements_txt.py
 pip-compile -o requirements_full.txt pyproject.toml
 ```
 

pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
 # https://packaging.python.org/en/latest/specifications/declaring-project-metadata/
 [project]
 name = "fwl-proteus"
-version = "24.10.30"
+version = "24.12.11"
 description = "Coupled atmosphere-interior framework to simulate the temporal evolution of rocky planets"
 readme = "README.md"
 requires-python = ">=3.11"
@@ -123,7 +123,7 @@ indent-style = "space"
 
 [tool.bumpversion]
 # https://callowayproject.github.io/bump-my-version/howtos/calver/
-current_version = "24.10.30"
+current_version = "24.12.11"
 parse = """(?x)                      # Verbose mode
     (?P<release>                     # The release part
         (?:[1-9][0-9])\\.            # YY.

requirements.txt

@@ -0,0 +1,15 @@
+# generated by tools/generate_requirements_txt.py
+attrs
+cattrs
+fwl-janus>=24.11.05
+fwl-mors>=24.11.18
+fwl-calliope>=24.9.10
+fwl-zephyrus>=24.10.15
+aragog>=0.1.8a0
+cmcrameri
+juliacall
+matplotlib
+netCDF4
+numpy
+pandas
+scipy

requirements_full.txt

@@ -0,0 +1,157 @@
+#
+# This file is autogenerated by pip-compile with Python 3.12
+# by the following command:
+#
+#    pip-compile --output-file=requirements_full.txt pyproject.toml
+#
+aragog==0.1.8a0
+    # via fwl-proteus (pyproject.toml)
+attrs==24.2.0
+    # via
+    #   cattrs
+    #   fwl-proteus (pyproject.toml)
+cattrs==24.1.2
+    # via fwl-proteus (pyproject.toml)
+certifi==2024.8.30
+    # via
+    #   netcdf4
+    #   requests
+cftime==1.6.4.post1
+    # via netcdf4
+charset-normalizer==3.4.0
+    # via requests
+click==8.1.7
+    # via
+    #   aragog
+    #   fwl-janus
+    #   fwl-mors
+cmcrameri==1.9
+    # via
+    #   fwl-calliope
+    #   fwl-proteus (pyproject.toml)
+contourpy==1.3.1
+    # via matplotlib
+cycler==0.12.1
+    # via matplotlib
+f90nml==1.4.4
+    # via fwl-janus
+fonttools==4.55.3
+    # via matplotlib
+fwl-calliope==24.9.10
+    # via fwl-proteus (pyproject.toml)
+fwl-janus==24.11.5
+    # via fwl-proteus (pyproject.toml)
+fwl-mors==24.11.18
+    # via
+    #   fwl-proteus (pyproject.toml)
+    #   fwl-zephyrus
+fwl-zephyrus==24.10.15
+    # via fwl-proteus (pyproject.toml)
+idna==3.10
+    # via requests
+juliacall==0.9.23
+    # via fwl-proteus (pyproject.toml)
+juliapkg==0.1.15
+    # via juliacall
+kiwisolver==1.4.7
+    # via matplotlib
+matplotlib==3.9.3
+    # via
+    #   aragog
+    #   cmcrameri
+    #   fwl-calliope
+    #   fwl-janus
+    #   fwl-mors
+    #   fwl-proteus (pyproject.toml)
+    #   fwl-zephyrus
+    #   seaborn
+natsort==8.4.0
+    # via fwl-janus
+netcdf4==1.7.2
+    # via
+    #   aragog
+    #   fwl-janus
+    #   fwl-proteus (pyproject.toml)
+numpy==1.26.4
+    # via
+    #   aragog
+    #   cftime
+    #   cmcrameri
+    #   contourpy
+    #   fwl-calliope
+    #   fwl-janus
+    #   fwl-mors
+    #   fwl-proteus (pyproject.toml)
+    #   fwl-zephyrus
+    #   matplotlib
+    #   netcdf4
+    #   pandas
+    #   scipy
+    #   seaborn
+    #   thermochem
+osfclient==0.0.5
+    # via
+    #   aragog
+    #   fwl-janus
+    #   fwl-mors
+packaging==24.2
+    # via
+    #   cmcrameri
+    #   matplotlib
+pandas==2.2.3
+    # via
+    #   fwl-janus
+    #   fwl-proteus (pyproject.toml)
+    #   seaborn
+    #   thermochem
+pillow==11.0.0
+    # via matplotlib
+platformdirs==3.11.0
+    # via
+    #   aragog
+    #   fwl-janus
+    #   fwl-mors
+pyparsing==3.2.0
+    # via matplotlib
+python-dateutil==2.9.0.post0
+    # via
+    #   matplotlib
+    #   pandas
+pytz==2024.2
+    # via pandas
+requests==2.32.3
+    # via
+    #   fwl-janus
+    #   osfclient
+scipy==1.14.1
+    # via
+    #   aragog
+    #   fwl-calliope
+    #   fwl-janus
+    #   fwl-mors
+    #   fwl-proteus (pyproject.toml)
+    #   thermochem
+seaborn==0.13.2
+    # via fwl-janus
+semver==3.0.2
+    # via juliapkg
+six==1.17.0
+    # via
+    #   osfclient
+    #   python-dateutil
+thermochem==0.8.2
+    # via aragog
+toml==0.10.2
+    # via fwl-janus
+tomlkit==0.13.2
+    # via fwl-janus
+tqdm==4.67.1
+    # via osfclient
+typed-configparser==1.1.0
+    # via aragog
+typing-extensions==4.12.2
+    # via aragog
+tzdata==2024.2
+    # via pandas
+urllib3==2.2.3
+    # via requests

src/proteus/__init__.py

@@ -2,6 +2,6 @@
 
 from .proteus import Proteus
 
-__version__ = '24.10.30'
+__version__ = '24.12.11'
 
 __all__ = ['Proteus']