2.2.0 #45
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Image build and test | |
| env: | |
| IMAGE_NAME: geoscienceaustralia/dea-coastlines | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| paths: | |
| - 'coastlines/**' | |
| - 'data/**' | |
| - 'tests/**' | |
| - '.github/workflows/dea-coastlines-image.yaml' | |
| - 'Dockerfile' | |
| - 'requirements.in' | |
| - 'requirements.txt' | |
| - 'setup.py' | |
| - 'codecov.yaml' | |
| pull_request: | |
| branches: | |
| - develop | |
| paths: | |
| - 'coastlines/**' | |
| - 'data/**' | |
| - 'tests/**' | |
| - '.github/workflows/dea-coastlines-image.yaml' | |
| - 'Dockerfile' | |
| - 'requirements.in' | |
| - 'requirements.txt' | |
| - 'setup.py' | |
| - 'codecov.yaml' | |
| release: | |
| types: [edited, published] | |
| permissions: | |
| id-token: write # Required for requesting Json web token | |
| contents: write # Required for actions/checkout | |
| pull-requests: write # Required for validation results comment bot | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v4 | |
| with: | |
| role-to-assume: arn:aws:iam::060378307146:role/github-actions-dea-notebooks--sandbox | |
| aws-region: ap-southeast-2 | |
| role-duration-seconds: 7200 # 2 hours | |
| - name: Get database credentials | |
| run: | | |
| username_password=$(aws ssm get-parameter --name /dea-sandbox-eks/sandbox_reader/db.creds --with-decryption --query Parameter.Value --output text) | |
| echo DATACUBE_DB_URL=postgresql://${username_password}@localhost:5432/odc >> $GITHUB_ENV | |
| - name: Open port forward to RDS | |
| run: | | |
| npx basti connect \ | |
| --custom-target-vpc vpc-086904199e505c1f6 \ | |
| --custom-target-host db-aurora-dea-sandbox-eks-1.cos5zfpkso9m.ap-southeast-2.rds.amazonaws.com \ | |
| --custom-target-port 5432 \ | |
| --local-port 5432 & | |
| # Wait until the connection comes up, but, if it doesn't, don't hang forever. | |
| npx wait-on --timeout 120000 --interval 1000 tcp:127.0.0.1:5432 | |
| echo "PGPORT=5432" >> $GITHUB_ENV | |
| echo "PGHOST=localhost" >> $GITHUB_ENV | |
| - name: Build DEA Coastlines docker image | |
| timeout-minutes: 30 | |
| shell: bash | |
| run: | | |
| docker build -t dea_coastlines . | |
| - name: Run integration tests | |
| run: | | |
| # Download tide modelling files and unzip | |
| wget --no-verbose https://www.dropbox.com/s/uemd8ib2vfw5nad/tide_models.zip?dl=1 -O tide_models.zip | |
| unzip -q tide_models.zip | |
| # Run integration tests using Docker | |
| docker run \ | |
| --net=host \ | |
| --env DATACUBE_DB_URL \ | |
| --env AWS_SESSION_TOKEN \ | |
| --env AWS_REGION \ | |
| --env AWS_ACCESS_KEY_ID \ | |
| --env AWS_SECRET_ACCESS_KEY \ | |
| --env AWS_SESSION_TOKEN \ | |
| --volume ${GITHUB_WORKSPACE}:/code \ | |
| --volume ${GITHUB_WORKSPACE}/tide_models:/var/share/tide_models \ | |
| dea_coastlines pytest -v --cov=coastlines --cov-report=xml tests | |
| # Commit validation results produced by integration tests back into repo | |
| - name: Commit validation results into repository | |
| uses: stefanzweifel/git-auto-commit-action@v4 | |
| if: github.event_name == 'pull_request' | |
| continue-on-error: true | |
| with: | |
| commit_message: Automatically update integration test validation results | |
| file_pattern: 'tests/stats_tests.png tests/stats_tests.csv tests/README.md' | |
| # Post validation tesults as comment on PR | |
| - name: Post validation results as comment | |
| uses: mshick/add-pr-comment@v2 | |
| if: github.event_name == 'pull_request' | |
| with: | |
| message: | | |
| ![](https://github.com/GeoscienceAustralia/dea-coastlines/blob/${{ github.head_ref }}/tests/stats_tests.png?raw=true") | |
| For full integration test results, refer to the [Tests directory README](https://github.com/GeoscienceAustralia/dea-coastlines/tree/${{ github.head_ref }}/tests). | |
| # Upload code coverage results | |
| - name: Upload coverage reports to Codecov | |
| uses: codecov/codecov-action@v3 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| # Add output GeoPackage data to Actions artifact so it can be downloaded | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: output_geopackage | |
| path: ./data/processed/tests/coastlines_tests.gpkg | |
| # Add output ESRI Shapefile data to Actions artifact so it can be downloaded | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: output_shps | |
| path: ./data/processed/tests/coastlines_tests.shp.zip | |
| push_ecr: | |
| needs: [test] | |
| runs-on: ubuntu-latest | |
| # Only run on a push to the develop branch OR a release | |
| if: (github.event_name == 'push' && github.ref == 'refs/heads/develop') || (github.event_name == 'release') | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| # If action is triggered by a release, tag image | |
| # using a custom image tag extracted from the release | |
| - name: Get current version tag from release to use as image tag | |
| if: github.event_name == 'release' | |
| run: | | |
| echo "RELEASE=${GITHUB_REF/refs\/tags\/}" >> $GITHUB_ENV | |
| # If action is trigged by a push (not release), tag image | |
| # using a tag based on the most recent commit hash | |
| - name: Get git commit hash for push to branch to use as image tag | |
| if: github.event_name != 'release' | |
| run: | | |
| echo "TAG=dev$(git rev-parse --short HEAD)" \ | |
| >> $GITHUB_ENV | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| role-to-assume: arn:aws:iam::538673716275:role/github-actions-role | |
| aws-region: ap-southeast-2 | |
| - name: Push image to ECR | |
| uses: whoan/docker-build-with-cache-action@master | |
| with: | |
| context: ./ | |
| registry: 538673716275.dkr.ecr.ap-southeast-2.amazonaws.com | |
| image_name: ${{ env.IMAGE_NAME }} | |
| image_tag: latest,${{ env.RELEASE }} |