Github Repository for the paper on the metagenomic sequencing of a new isolate of feline papilloma virus isolated from the human skin of a house cat owner.
Manuscript title: Novel feline papillomavirus isolate P20 assembled from metagenomic data isolated from human skin of a cat owner
Scripts and data availability can be found in the manuscript and in the repo for our previous paper on the human skin virome.
The data for this manuscript can be found here: RAW DATA and ASSEMBLED VIRAL GENOME.
To cite this work or code:
This work is deposited to bioRxiv and is currently being reviewed for publication in a journal.
Graham E, et al. To be updated upon acceptance for publication.
ABSTRACT A novel feline papillomavirus isolate was assembled from metagenomic sequencing data collected from the human skin of a house cat owner. This circular papillomavirus isolate P20 is 8069 bp in length, has a G/C content of 54.38%, and displays genome organization typical of feline papillomaviruses with six annotated protein coding regions, but only exhibits approximately 75% sequence synteny to other feline papillomavirus genomes.
FUNDING This work was completed using the Holland Computing Center of the University of Nebraska, which receives support from the Nebraska Research Initiative. This work was supported by the Department of Justice grant numbers 2017-IJ-CX-0025, 2019-75-CX-0075, and 2019-R2-CX-0048. All of the funding agencies had no role in study design, data collection and interpretation, or the decision to submit the work for publication.
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