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[DEPRECATED] [EXPERIMENTAL] Segmentation and extraction of pollen pictures using basic threshold techniques on raw microscopic images.

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[EXPERIMENTAL] Pollen detector

Current status: DEPRECATED

Small experimental GUI software developed to test a basic threshold technique to extract single pollen pictures from a single microscopic image. It heavily relies on BoofCV libraries to work and more information about thresholding in BoofCV can be found here.

This software exposes 6 parameters in a user-friendly UI with automatic updates to the preview window, marking each detection with a precise contour (in red) and a bounding box (in green), each can be used further to improve detection.

Used in this project

  • Java 1.7
  • BoofCV library
  • Maven

Usage

Execute with polen_detector.jar <image_path> where <image_path> is the full path of the image to be analyzed by the software.

Future

I have no plans on updating this project (there are multiple things that could be improved) since it started just as a proof of concept on thresholding as a segmentation technique in pollen images that showed to be very imprecise.

Sample image of the software running and results shown

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[DEPRECATED] [EXPERIMENTAL] Segmentation and extraction of pollen pictures using basic threshold techniques on raw microscopic images.

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