Merge pull request #1 from IBPA/master

code reorganization for conda package
IBPA · Jul 9, 2021 · f571e29 · f571e29
2 parents 68d7168 + 5d0d461
commit f571e29
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Showing 6 changed files with 6 additions and 6 deletions.
diff --git a/src/common.R → R/common_OMMs.R b/src/common.R → R/common_OMMs.R
diff --git a/convert_to_friendlyname_OMMs.R → R/convert_to_friendlyname_OMMs.R b/convert_to_friendlyname_OMMs.R → R/convert_to_friendlyname_OMMs.R
@@ -4,7 +4,7 @@
 suppressPackageStartupMessages(library("argparse"))
 library(stringr)
 
-source("./src/common.R")
+source("common_OMMs.R")
 
 get_args <- function() {
   parser <- ArgumentParser(description = "Use friendly food names instead of uids for the OMMs.")

diff --git a/generate_OMMs.R → R/generate_OMMs.R b/generate_OMMs.R → R/generate_OMMs.R
@@ -7,7 +7,7 @@ library(readxl)
 library(stringr)
 library(gurobi)
 
-source("./src/common.R")
+source("common_OMMs.R")
 DEV_MODE <- FALSE
 
 # Parse and return command line arguments of this script (return defaults if DEV_MODE is TRUE).

diff --git a/select_OMMs.R → R/select_OMMs.R b/select_OMMs.R → R/select_OMMs.R
@@ -9,8 +9,8 @@ library(ggplot2)
 library(reshape2)
 library(scales)
 
-source("./src/common.R")
-source("./src/theme_util.R")
+source("common_OMMs.R")
+source("theme_util_OMMs.R")
 DEV_MODE <- FALSE
 
 # Parse and return command line arguments of this script (return defaults if DEV_MODE is TRUE).

diff --git a/src/theme_util.R → R/theme_util_OMMs.R b/src/theme_util.R → R/theme_util_OMMs.R
diff --git a/visualize_OMMs.R → R/visualize_OMMs.R b/visualize_OMMs.R → R/visualize_OMMs.R
@@ -9,8 +9,8 @@ library(ggplot2)
 library(reshape2)
 library(scales)
 
-source("./src/common.R")
-source("./src/theme_util.R")
+source("common.R")
+source("theme_util.R")
 DEV_MODE <- FALSE
 
 # Parse and return command line arguments of this script (return defaults if DEV_MODE is TRUE).