variant visualization

A small jupyter notebook which is used to highlight variant .pdb files using py3dmol

Setup

1. Clone this repository and change directory:

   git clone https://github.com/jerkrause/variant_visualization
   cd variant_visualization

2. Create a conda environment and activate it:

   conda create -n pdb_visualizer python=3.11.9
   conda activate pdb_visualizer

3. Install requirements:

   pip install -r requirements.txt

4. Run the streamlit application:

   streamlit run run_pdb_vis.py