Committing first version of Mollusca cultural values vignette

IMERSS · Nov 17, 2023 · d5368af · d5368af
1 parent 6e0a1be
commit d5368af
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Showing 10 changed files with 131 additions and 68 deletions.
diff --git a/config.json5 b/config.json5
@@ -15,6 +15,11 @@
                         taxonId: 47115,
                         taxonName: "Mollusca"
                     },
+                    Cultural: {
+                        type: "maxwell.bioblitzDiversityPane",
+                        vizFile: "%resourceBase/data/Galiano-2023-Cultural-Mollusca.json.lz4",
+                        nativeDataOnly: true
+                    },
                     Status: {
                         type: "maxwell.bioblitzStatusPane",
                         vizFile: "%resourceBase/data/Galiano-2023-Status-Mollusca.json.lz4",

diff --git a/docs/Mollusca-Reknitted.html b/docs/Mollusca-Reknitted.html
diff --git a/docs/css/imerss-viz-all.css b/docs/css/imerss-viz-all.css
@@ -820,10 +820,20 @@ a.ui-button:active,
     margin-bottom: -0.2rem;
 }
 
+/* No idea why we do this, but we need to undo it for fld-imerss-media-name */
 .fl-taxonDisplay-row.fld-taxonDisplay-expandable-remainder.fl-taxonDisplay-runon-remainder :first-child {
     margin-top: -0.5rem;
 }
 
+.fl-taxonDisplay-row.fld-taxonDisplay-expandable-remainder.fl-taxonDisplay-runon-remainder .fld-imerss-media-name {
+    padding-bottom: 15px;
+    font-size: 1.1rem;
+}
+
+.fl-taxonDisplay-row .fld-imerss-media-image {
+    padding-bottom: 5px;
+}
+
 .fl-taxonDisplay-row.fld-taxonDisplay-expandable-remainder.fl-taxonDisplay-runon-remainder.fl-taxonDisplay-row {
     border-bottom: none;
 }

diff --git a/docs/data/Galiano-2023-Cultural-Mollusca.json.lz4 b/docs/data/Galiano-2023-Cultural-Mollusca.json.lz4
diff --git a/docs/js/imerss-viz-all.js b/docs/js/imerss-viz-all.js
diff --git a/docs/js/imerss-viz-all.js.map b/docs/js/imerss-viz-all.js.map
diff --git a/package-lock.json b/package-lock.json
diff --git a/package.json b/package.json
@@ -10,7 +10,7 @@
     "dependencies": {},
     "devDependencies": {
         "infusion": "4.6.0",
-        "imerss-bioinfo": "1.9.0",
+        "imerss-bioinfo": "1.11.0",
         "@imerss/inat-components": "2.0.1",
         "json5": "2.2.3",
         "lz4": "0.6.5",

diff --git a/scripts/Cultural_map_script.R b/scripts/Cultural_map_script.R
@@ -1,4 +1,4 @@
-# Map Galiano Island's marine animal diversity
+# Map Galiano Island's marine animal diversity for taxa with cultural significance
 
 # Load libraries
 
@@ -20,6 +20,7 @@ mx_diversityRowToOptions <- function (row) {
   return (list(mx_regionId = row$cell_id, mx_richness = row$richness))
 }
 
+# Called with lower-case rendering of phylum name, e.g. "mollusca"
 mx_cultural_map <- function (taxon) {
     title <- str_to_title(taxon);
 

diff --git a/viz_data/Galiano-2023-Cultural-Mollusca.json.lz4 b/viz_data/Galiano-2023-Cultural-Mollusca.json.lz4