Version 1.07.2 #523
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| name: InChI Continuous Integration | |
| on: | |
| push: | |
| branches: [ main, rwth ] | |
| pull_request: | |
| branches: [ main, rwth ] | |
| workflow_dispatch: | |
| jobs: | |
| test_glibc_gcc: | |
| runs-on: ubuntu-latest | |
| container: gcc:14 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Install test dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install -e INCHI-1-TEST[invariance-tests] | |
| - uses: ./.github/actions/compile_inchi_exe | |
| id: compile_exe | |
| - name: Run executable tests | |
| if: ${{ !cancelled() && steps.compile_exe.outcome == 'success' }} | |
| run: pytest INCHI-1-TEST/tests/test_executable | |
| - uses: ./.github/actions/compile_inchi_lib | |
| id: compile_lib | |
| - name: Run multithreading test | |
| if: ${{ !cancelled() && steps.compile_lib.outcome == 'success' }} | |
| run: python INCHI-1-TEST/tests/test_library/test_multithreading.py | |
| timeout-minutes: 1 | |
| - uses: ./.github/actions/regression_tests | |
| if: ${{ !cancelled() && steps.compile_lib.outcome == 'success' }} | |
| with: | |
| artifact-name: regression-test-results_glibc_gcc | |
| - uses: ./.github/actions/invariance_tests | |
| if: ${{ !cancelled() && steps.compile_lib.outcome == 'success' }} | |
| with: | |
| artifact-name: invariance-test-results_glibc_gcc | |
| test_musl_gcc: | |
| runs-on: ubuntu-latest | |
| # We need Python 3.12. That's why we're using alpine:edge. | |
| # Currently (May 2024) edge is the only Alpine version with Python 3.12. | |
| # Once edge advances, the Alpine Python version will be bumped and `python -m pip install -e INCHI-1-TEST` will break. | |
| # TODO: Find more sustainable solution. | |
| container: alpine:edge | |
| steps: | |
| - name: Install build and test environment | |
| run: | | |
| apk add bash git musl-dev gcc g++ make python3 py-pip | |
| # We need to install git before checking out the repository. | |
| # Otherwise, the repository will be downloaded using the GitHub REST API instead of git. | |
| - uses: actions/checkout@v4 | |
| - name: Show Python version | |
| run: | | |
| python --version | |
| - name: Configure pip to break system packages | |
| run: | | |
| mkdir -p ~/.config/pip | |
| cat <<EOT >> ~/.config/pip/pip.conf | |
| [global] | |
| break-system-packages = true | |
| EOT | |
| - name: Install test dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install -e INCHI-1-TEST | |
| - uses: ./.github/actions/compile_inchi_exe | |
| id: compile_exe | |
| - name: Run executable tests | |
| if: ${{ !cancelled() && steps.compile_exe.outcome == 'success' }} | |
| run: pytest INCHI-1-TEST/tests/test_executable | |
| - uses: ./.github/actions/compile_inchi_lib | |
| id: compile_lib | |
| - name: Run multithreading test | |
| if: ${{ !cancelled() && steps.compile_lib.outcome == 'success' }} | |
| run: python INCHI-1-TEST/tests/test_library/test_multithreading.py | |
| timeout-minutes: 1 | |
| - uses: ./.github/actions/regression_tests | |
| if: ${{ !cancelled() && steps.compile_lib.outcome == 'success' }} | |
| with: | |
| artifact-name: regression-test-results_musl_gcc | |
| # FIXME: We don't run invariance test on alpine yet because of difficulties with RDKit installation. |