Fix name

Return executable's standard error as stderr, not stdout
IUPAC-InChI · Oct 25, 2024 · dd587af · dd587af
1 parent 9fffb04
commit dd587af
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Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/INCHI-1-TEST/tests/test_executable/conftest.py b/INCHI-1-TEST/tests/test_executable/conftest.py
@@ -17,7 +17,7 @@ def pytest_addoption(parser):
 
 @dataclass
 class InchiResult:
-    stdout: str
+    stderr: str
     inchi: str
     aux_info: str
 
@@ -66,7 +66,7 @@ def _run_inchi_exe(molfile: str, args: str = "") -> InchiResult:
         output = output_path.read_text()
 
         return InchiResult(
-            stdout=result.stderr,
+            stderr=result.stderr,  # contains log
             inchi=parse_inchi_from_executable_output(output),
             aux_info=parse_aux_info_from_executable_output(output),
         )

diff --git a/INCHI-1-TEST/tests/test_executable/test_github_40.py b/INCHI-1-TEST/tests/test_executable/test_github_40.py
@@ -108,4 +108,4 @@ def molfile():
 def test_spiro_compound_chiral(molfile, run_inchi_exe):
     result = run_inchi_exe(molfile)
 
-    assert "Warning (Not chiral) structure #1." not in result.stdout
+    assert "Warning (Not chiral) structure #1." not in result.stderr
diff --git a/INCHI-1-TEST/tests/test_executable/test_github_52.py b/INCHI-1-TEST/tests/test_executable/test_github_52.py
@@ -41,7 +41,7 @@ def test_empty_bondblock(molfile_empty_bondblock, run_inchi_exe):
 
     assert (
         "Error 71 (no InChI; Error: No V3000 CTAB end marker) inp structure #1."
-        not in result.stdout
+        not in result.stderr
     )
 
 
@@ -50,5 +50,5 @@ def test_no_bondblock(molfile_no_bondblock, run_inchi_exe):
 
     assert (
         "Error 71 (no InChI; Error: No V3000 CTAB end marker) inp structure #1."
-        not in result.stdout
+        not in result.stderr
     )