ENH: Upgrade CI for ITK 5.4.0

Upgrade CI testing to use the latest ITK 5.4.0 version and CI configuration.

Committed via https://github.com/asottile/all-repos

.github/workflows/build-test-package.yml

@@ -1,281 +1,15 @@
+
 name: Build, test, package
 
 on: [push,pull_request]
 
 jobs:
- build-test-cxx:
- runs-on: ${{ matrix.os }}
- strategy:
- max-parallel: 3
- matrix:
- os: [ubuntu-18.04, windows-2019, macos-10.15]
- include:
- - os: ubuntu-18.04
- c-compiler: "gcc"
- cxx-compiler: "g++"
- itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
- cmake-build-type: "MinSizeRel"
- - os: windows-2019
- c-compiler: "cl.exe"
- cxx-compiler: "cl.exe"
- itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
- cmake-build-type: "Release"
- - os: macos-10.15
- c-compiler: "clang"
- cxx-compiler: "clang++"
- itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
- cmake-build-type: "MinSizeRel"
-
- steps:
- - uses: actions/checkout@v2
-
- - name: Set up Python 3.8
- uses: actions/setup-python@v2
- with:
- python-version: 3.8
-
- - name: Install build dependencies
- run: |
- python -m pip install --upgrade pip
- python -m pip install ninja
-
- - name: Get specific version of CMake, Ninja
- uses: lukka/get-cmake@v3.18.3
-
- - name: Download ITK
- run: |
- cd ..
- git clone https://github.com/InsightSoftwareConsortium/ITK.git
- cd ITK
- git checkout ${{ matrix.itk-git-tag }}
-
- - name: Build ITK
- if: matrix.os != 'windows-2019'
- run: |
- cd ..
- mkdir ITK-build
- cd ITK-build
- cmake -DCMAKE_C_COMPILER:FILEPATH="${{ matrix.c-compiler }}" -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_CXX_COMPILER="${{ matrix.cxx-compiler }}" -DCMAKE_BUILD_TYPE:STRING=${{ matrix.cmake-build-type }} -DBUILD_TESTING:BOOL=OFF -GNinja ../ITK
- ninja
-
- - name: Build ITK
- if: matrix.os == 'windows-2019'
- run: |
- cd ..
- mkdir ITK-build
- cd ITK-build
- call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
- cmake -DCMAKE_C_COMPILER:FILEPATH="${{ matrix.c-compiler }}" -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_CXX_COMPILER="${{ matrix.cxx-compiler }}" -DCMAKE_BUILD_TYPE:STRING=${{ matrix.cmake-build-type }} -DBUILD_TESTING:BOOL=OFF -GNinja ../ITK
- ninja
- shell: cmd
-
- - name: Fetch CTest driver script
- run: |
- curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITK/dashboard/itk_common.cmake -O
-
- - name: Configure CTest script
- shell: bash
- run: |
- operating_system="${{ matrix.os }}"
- cat > dashboard.cmake << EOF
- set(CTEST_SITE "GitHubActions")
- file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/.." CTEST_DASHBOARD_ROOT)
- file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/" CTEST_SOURCE_DIRECTORY)
- file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/../build" CTEST_BINARY_DIRECTORY)
- set(dashboard_source_name "${GITHUB_REPOSITORY}")
- if(ENV{GITHUB_REF} MATCHES "master")
- set(branch "-master")
- set(dashboard_model "Continuous")
- else()
- set(branch "-${GITHUB_REF}")
- set(dashboard_model "Experimental")
- endif()
- set(CTEST_BUILD_NAME "${GITHUB_REPOSITORY}-${operating_system}-\${branch}")
- set(CTEST_UPDATE_VERSION_ONLY 1)
- set(CTEST_TEST_ARGS \${CTEST_TEST_ARGS} PARALLEL_LEVEL \${PARALLEL_LEVEL})
- set(CTEST_BUILD_CONFIGURATION "Release")
- set(CTEST_CMAKE_GENERATOR "Ninja")
- set(CTEST_CUSTOM_WARNING_EXCEPTION
- \${CTEST_CUSTOM_WARNING_EXCEPTION}
- # macOS Azure VM Warning
- "ld: warning: text-based stub file"
- )
- set(dashboard_no_clean 1)
- set(ENV{CC} ${{ matrix.c-compiler }})
- set(ENV{CXX} ${{ matrix.cxx-compiler }})
- if(WIN32)
- set(ENV{PATH} "\${CTEST_DASHBOARD_ROOT}/ITK-build/bin;\$ENV{PATH}")
- endif()
- set(dashboard_cache "
- ITK_DIR:PATH=\${CTEST_DASHBOARD_ROOT}/ITK-build
- BUILD_TESTING:BOOL=ON
- ")
- string(TIMESTAMP build_date "%Y-%m-%d")
- message("CDash Build Identifier: \${build_date} \${CTEST_BUILD_NAME}")
- message("CTEST_SITE = \${CTEST_SITE}")
- include(\${CTEST_SCRIPT_DIRECTORY}/itk_common.cmake)
- EOF
- cat dashboard.cmake
-
- - name: Build and test
- if: matrix.os != 'windows-2019'
- run: |
- ctest --output-on-failure -j 2 -V -S dashboard.cmake
-
- - name: Build and test
- if: matrix.os == 'windows-2019'
- run: |
- call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
- ctest --output-on-failure -j 2 -V -S dashboard.cmake
- shell: cmd
-
- build-linux-python-packages:
- runs-on: ubuntu-20.04
- strategy:
- max-parallel: 2
- matrix:
- python-version: [37, 38, 39, 310]
- include:
- - itk-python-git-tag: "v5.3rc04"
-
- steps:
- - uses: actions/checkout@v2
-
- - name: 'Free up disk space'
- run: |
- # Workaround for https://github.com/actions/virtual-environments/issues/709
- df -h
- sudo apt-get clean
- sudo rm -rf "/usr/local/share/boost"
- sudo rm -rf "$AGENT_TOOLSDIRECTORY"
- df -h
-
- - name: 'Fetch build script'
- run: |
- curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITKPythonPackage/master/scripts/dockcross-manylinux-download-cache-and-build-module-wheels.sh -O
- chmod u+x dockcross-manylinux-download-cache-and-build-module-wheels.sh
-
- - name: 'Build 🐍 Python 📦 package'
- run: |
- export ITK_PACKAGE_VERSION=${{ matrix.itk-python-git-tag }}
- ./dockcross-manylinux-download-cache-and-build-module-wheels.sh cp${{ matrix.python-version }}
-
- - name: Publish Python package as GitHub Artifact
- uses: actions/upload-artifact@v1
- with:
- name: LinuxWheel${{ matrix.python-version }}
- path: dist
-
- build-macos-python-packages:
- runs-on: macos-10.15
- strategy:
- max-parallel: 2
- matrix:
- include:
- - itk-python-git-tag: "v5.3rc04"
-
- steps:
- - uses: actions/checkout@v2
-
- - name: 'Specific XCode version'
- run: |
- sudo xcode-select -s "/Applications/Xcode_11.7.app"
-
- - name: Get specific version of CMake, Ninja
- uses: lukka/get-cmake@v3.18.3
-
- - name: 'Fetch build script'
- run: |
- curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITKPythonPackage/master/scripts/macpython-download-cache-and-build-module-wheels.sh -O
- chmod u+x macpython-download-cache-and-build-module-wheels.sh
-
- - name: 'Build 🐍 Python 📦 package'
- run: |
- export ITK_PACKAGE_VERSION=${{ matrix.itk-python-git-tag }}
- export MACOSX_DEPLOYMENT_TARGET=10.9
- ./macpython-download-cache-and-build-module-wheels.sh
-
- - name: Publish Python package as GitHub Artifact
- uses: actions/upload-artifact@v1
- with:
- name: MacOSWheels
- path: dist
-
- build-windows-python-packages:
- runs-on: windows-2019
- strategy:
- max-parallel: 2
- matrix:
- python-version-minor: [7, 8, 9, 10]
- include:
- - itk-python-git-tag: "v5.3rc04"
-
- steps:
- - name: Get specific version of CMake, Ninja
- uses: lukka/get-cmake@v3.18.3
-
- - uses: actions/checkout@v2
- with:
- path: "im"
-
- - name: 'Install Python'
- run: |
- $pythonArch = "64"
- $pythonVersion = "3.${{ matrix.python-version-minor }}"
- iex ((new-object net.webclient).DownloadString('https://raw.githubusercontent.com/scikit-build/scikit-ci-addons/master/windows/install-python.ps1'))
-
- - name: 'Fetch build dependencies'
- shell: bash
- run: |
- mv im ../../
- cd ../../im
- curl -L "https://github.com/InsightSoftwareConsortium/ITKPythonBuilds/releases/download/${{ matrix.itk-python-git-tag }}/ITKPythonBuilds-windows.zip" -o "ITKPythonBuilds-windows.zip"
- 7z x ITKPythonBuilds-windows.zip -o/c/P -aoa -r
- curl -L "https://data.kitware.com/api/v1/file/5c0ad59d8d777f2179dd3e9c/download" -o "doxygen-1.8.11.windows.bin.zip"
- 7z x doxygen-1.8.11.windows.bin.zip -o/c/P/doxygen -aoa -r
- curl -L "https://data.kitware.com/api/v1/file/5bbf87ba8d777f06b91f27d6/download/grep-win.zip" -o "grep-win.zip"
- 7z x grep-win.zip -o/c/P/grep -aoa -r
-
- - name: 'Build 🐍 Python 📦 package'
- shell: cmd
- run: |
- cd ../../im
- call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
- set PATH=C:\P\grep;%PATH%
- set CC=cl.exe
- set CXX=cl.exe
- C:\Python3${{ matrix.python-version-minor }}-x64\python.exe C:\P\IPP\scripts\windows_build_module_wheels.py --py-envs "3${{ matrix.python-version-minor }}-x64" --no-cleanup
-
- - name: Publish Python package as GitHub Artifact
- uses: actions/upload-artifact@v1
- with:
- name: WindowsWheel3.${{ matrix.python-version-minor }}
- path: ../../im/dist
-
- publish-python-packages-to-pypi:
- needs:
- - build-linux-python-packages
- - build-macos-python-packages
- - build-windows-python-packages
- runs-on: ubuntu-18.04
-
- steps:
- - name: Download Python Packages
- uses: actions/download-artifact@v2
-
- - name: Prepare packages for upload
- run: |
- ls -R
- for d in */; do
- mv ${d}/*.whl .
- done
- mkdir dist
- mv *.whl dist/
- ls dist
-
- - name: Publish 🐍 Python 📦 package to PyPI
- if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
- uses: pypa/gh-action-pypi-publish@master
- with:
- user: __token__
- password: ${{ secrets.pypi_password }}
+ cxx-build-workflow:
+ uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/build-test-cxx.yml@v5.4.0
+
+ python-build-workflow:
+ uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/build-test-package-python.yml@v5.4.0
+ with:
+ test-notebooks: false
+ secrets:
+ pypi_password: ${{ secrets.pypi_password }}