Skip to content

v1.0
Compare
Choose a tag to compare
@sanchit-misra sanchit-misra released this 19 May 14:12
· 256 commits to main since this release
1.0
26928b3

First version of Open Omics Acceleration Framework containing the accelerated versions of the following tools and pipelines of digital biology.

Tools:

  • BWA-MEM2: accelerated version of BWA-MEM
  • MM2-Fast: accelerated version of minimap2
  • UMAP_fast: accelerated version of UMAP algorithm used for visualization
  • Accelerated version of AtacWorks that performs denoising of ATAC-Seq data

Pipelines

  • A Single cell RNA-Seq analysis pipeline for clustering cells starting with a cell-by-gene matrix.
Assets 3
Loading