Adding more to the output table

app/pages/generate_root_system.py

@@ -18,6 +18,7 @@
     build_collapsible,
     build_common_components,
     build_common_layout,
+    get_out_table_df,
 )
 from deeprootgen.pipeline import get_simulation_uuid
 
@@ -166,13 +167,9 @@ def save_runs(n_clicks: int, simulation_runs: list) -> None:
 def load_runs(list_of_contents: list, list_of_names: list) -> tuple:
     _, content_string = list_of_contents[0].split(",")
     decoded = base64.b64decode(content_string).decode("utf-8")
-    split_lines = decoded.split("\n")
-    split_lines.pop(0)
+    from io import StringIO
 
-    workflow_urls = []
-    for workflow_url in split_lines:
-        if workflow_url != "":
-            workflow_urls.append({"workflow_url": workflow_url})
+    workflow_urls = pd.read_csv(StringIO(decoded)).to_dict("records")
 
     toast_message = f"Loading run history from: {list_of_names[0]}"
     return [workflow_urls], True, toast_message
@@ -279,7 +276,6 @@ def run_root_model(
         timeout=0,
     )
 
-    simulation_uuid
     flow_run_id = str(flow_data.id)
     flow_name = flow_data.name
     simulation_tag = form_inputs["simulation_tag"]
@@ -295,7 +291,10 @@ def run_root_model(
 
     simulation_runs.append(
         {
-            "workflow_url": f"<a href='{prefect_flow_url}' target='_blank'>{prefect_flow_url}</a>"
+            "workflow": f"<a href='{prefect_flow_url}' target='_blank'>{flow_name}</a>",
+            "tag": simulation_tag,
+            "date": datetime.today().strftime("%Y-%m-%d-%H-%M"),
+            "seed": form_inputs["random_seed"],
         }
     )
 
@@ -343,7 +342,7 @@ def layout() -> html.Div:
         )
 
     input_components = dbc.Col([parameter_components, data_io_components])
-    simulation_run_df = pd.DataFrame([], columns=["workflow_url"])
+    simulation_run_df = get_out_table_df()
 
     simulation_results_data = {"simulation-runs-table": simulation_run_df}
 

deeprootgen/form/__init__.py

@@ -1 +1,6 @@
-from .components import build_collapsible, build_common_components, build_common_layout
+from .components import (
+    build_collapsible,
+    build_common_components,
+    build_common_layout,
+    get_out_table_df,
+)

deeprootgen/form/components.py

@@ -9,6 +9,7 @@
 from pydoc import locate
 
 import dash_bootstrap_components as dbc
+import pandas as pd
 from dash import dcc, html
 
 
@@ -287,3 +288,14 @@ def build_common_layout(
         ),
     )
     return layout
+
+
+def get_out_table_df() -> pd.DataFrame:
+    """Get the default output table as a dataframe.
+
+    Returns:
+        pd.DataFrame:
+            The output table as a dataframe.
+    """
+    out_df = pd.DataFrame([], columns=["workflow", "tag", "date", "seed"])
+    return out_df

deeprootgen/pipeline/experiment.py

@@ -12,6 +12,7 @@
 
 import mlflow
 import yaml
+from ydata_profiling import ProfileReport
 
 from ..data_model import RootSimulationModel
 from ..model import RootSystemSimulation
@@ -149,3 +150,8 @@ def log_simulation(
     outfile = osp.join(OUT_DIR, f"{time_now}-{task}_hgraph.html")
     fig.write_html(outfile)
     mlflow.log_artifact(outfile)
+
+    profile = ProfileReport(node_df, title="Root Model Report")
+    outfile = osp.join(OUT_DIR, f"{time_now}-{task}_data_profile.html")
+    profile.to_file(outfile)
+    mlflow.log_artifact(outfile)