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Releases: JuliaPhylo/PhyloCoalSimulations.jl

v1.0.0

11 Dec 22:11
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PhyloCoalSimulations v1.0.0

Diff since v0.1.3

first stable release, compatible with PhyloNetworks v1.0.0.

new features:
gene_edgemapping!, population_mappedto (now exported)

Merged pull requests:

v0.1.3

17 May 13:33
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PhyloCoalSimulations v0.1.3

Diff since v0.1.2

Merged pull requests:

  • simulator can take user-defined random number generator (#12) (@cecileane)

Closed issues:

  • Parenthetical format in simulated gene trees (#11)

v0.1.2

03 Apr 22:06
ef221b0
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PhyloCoalSimulations v0.1.2

  • depends on PhyloNetworks v0.16 for accessors (e.g. getchildedge).
  • breaking change (on internal methods): hassinglechild and singlechildedge were removed from here.
  • better doc, about correlated inheritance model in particular

Diff since v0.1.1

Merged pull requests:

  • v0.1.2; bump compat for PhyloNetworks to v0.16 (#10) (@cecileane)

v0.1.1

15 Jan 00:09
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PhyloCoalSimulations v0.1.1

new features:

option for correlated inheritanced: correlated parents for multiple lineages coming to a hybrid
iterator over degree-2 nodes mapping the gene tree into the species network

bug fixes:

check for non-missing edge lengths

v0.1.0

22 Aug 22:21
8bd5c50
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PhyloCoalSimulations v0.1.0

Merged pull requests: