Releases: JuliaPhylo/PhyloCoalSimulations.jl
Releases · JuliaPhylo/PhyloCoalSimulations.jl
v1.0.0
PhyloCoalSimulations v1.0.0
first stable release, compatible with PhyloNetworks v1.0.0.
new features:
gene_edgemapping!, population_mappedto (now exported)
Merged pull requests:
- links cecileane / crsl4 -> juliaphylo (#13) (@cecileane)
- Edge encoding (#15) (@jjustison)
- Bump actions/checkout from 2 to 4 (#19) (@dependabot[bot])
v0.1.3
PhyloCoalSimulations v0.1.3
Merged pull requests:
- simulator can take user-defined random number generator (#12) (@cecileane)
Closed issues:
- Parenthetical format in simulated gene trees (#11)
v0.1.2
PhyloCoalSimulations v0.1.2
- depends on PhyloNetworks v0.16 for accessors (e.g. getchildedge).
- breaking change (on internal methods): hassinglechild and singlechildedge were removed from here.
- better doc, about correlated inheritance model in particular
Merged pull requests:
- v0.1.2; bump compat for PhyloNetworks to v0.16 (#10) (@cecileane)
v0.1.1
PhyloCoalSimulations v0.1.1
new features:
option for correlated inheritanced: correlated parents for multiple lineages coming to a hybrid
iterator over degree-2 nodes mapping the gene tree into the species network
bug fixes:
check for non-missing edge lengths