docs: remove the InteractiveUtils and Literate deps

LuxDL · Sep 22, 2024 · 71f008b · 71f008b
1 parent 55caf08
commit 71f008b
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Showing 12 changed files with 8 additions and 37 deletions.
diff --git a/docs/run_single_tutorial.jl b/docs/run_single_tutorial.jl
@@ -8,6 +8,7 @@ name = ARGS[1]
 pkg_log_path = joinpath(storage_dir, "$(name)_pkg.log")
 output_directory = ARGS[2]
 path = ARGS[3]
+push!(LOAD_PATH, "@literate") # Should have the Literate and InteractiveUtils packages
 
 io = open(pkg_log_path, "w")
 warn_old_version = try
@@ -16,7 +17,7 @@ warn_old_version = try
 catch err
  err isa Pkg.Resolve.ResolverError || rethrow()
  @warn "Failed to install the latest version of Lux.jl. This is possible when the \
- downstream packages haven't been updated to support latest releases yet."
+ downstream packages haven't been updated to support latest releases yet." err=err
  true
 end
 Pkg.instantiate(; io)
@@ -26,7 +27,7 @@ using Literate
 
 function preprocess(path, str)
  if warn_old_version
- st = """
+ str = """
  !!! danger "Using older version of Lux.jl"
 
  This tutorial cannot be run on the latest Lux.jl release due to downstream

diff --git a/docs/tutorials.jl b/docs/tutorials.jl
@@ -55,6 +55,8 @@ const NTASKS = min(
 
 @info "Starting Lux Tutorial Build with $(NTASKS) tasks."
 
+run(`$(Base.julia_cmd()) --startup=no --code-coverage=user --threads=$(Threads.nthreads()) --project=@literate -e 'import Pkg; Pkg.add(["Literate", "InteractiveUtils"])'`)
+
 asyncmap(TUTORIALS_BUILDING; ntasks=NTASKS) do (i, (d, p))
  @info "Running Tutorial $(i): $(p) on task $(current_task())"
  path = joinpath(@__DIR__, "..", "examples", p)
@@ -66,8 +68,7 @@ asyncmap(TUTORIALS_BUILDING; ntasks=NTASKS) do (i, (d, p))
  withenv("JULIA_NUM_THREADS" => "$(Threads.nthreads())",
  "JULIA_CUDA_HARD_MEMORY_LIMIT" => "$(100 ÷ NTASKS)%",
  "JULIA_PKG_PRECOMPILE_AUTO" => "0", "JULIA_DEBUG" => "Literate") do
- cmd = `$(Base.julia_cmd()) --code-coverage=user --threads=$(Threads.nthreads()) --project=$(tutorial_proj) "$(file)" "$(name)" "$(output_directory)" "$(path)"`
- run(cmd)
+ run(`$(Base.julia_cmd()) --startup=no --code-coverage=user --threads=$(Threads.nthreads()) --project=$(tutorial_proj) "$(file)" "$(name)" "$(output_directory)" "$(path)"`)
  end
 
  return

diff --git a/examples/Basics/Project.toml b/examples/Basics/Project.toml
@@ -1,8 +1,6 @@
 [deps]
 ComponentArrays = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66"
 ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 Optimisers = "3bd65402-5787-11e9-1adc-39752487f4e2"
@@ -14,7 +12,6 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 CUDA_Driver_jll = "0.9, 0.10"
 ComponentArrays = "0.15"
 ForwardDiff = "0.10"
-Literate = "2"
 Lux = "1"
 LuxCUDA = "0.3"
 Optimisers = "0.3"

diff --git a/examples/BayesianNN/Project.toml b/examples/BayesianNN/Project.toml
@@ -1,9 +1,7 @@
 [deps]
 CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
 Functors = "d9f16b24-f501-4c13-a1f2-28368ffc5196"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
@@ -14,7 +12,6 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 CairoMakie = "0.12"
 Functors = "0.4"
 LinearAlgebra = "1"
-Literate = "2"
 Lux = "1"
 Random = "1"
 Tracker = "0.2"

diff --git a/examples/GravitationalWaveForm/Project.toml b/examples/GravitationalWaveForm/Project.toml
@@ -1,9 +1,7 @@
 [deps]
 CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
 ComponentArrays = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 LineSearches = "d3d80556-e9d4-5f37-9878-2ab0fcc64255"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 Optimization = "7f7a1694-90dd-40f0-9382-eb1efda571ba"
 OptimizationOptimJL = "36348300-93cb-4f02-beb5-3c3902f8871e"
@@ -16,7 +14,6 @@ SciMLSensitivity = "1ed8b502-d754-442c-8d5d-10ac956f44a1"
 CairoMakie = "0.12"
 ComponentArrays = "0.15"
 LineSearches = "7"
-Literate = "2"
 Lux = "1"
 Optimization = "4"
 OptimizationOptimJL = "0.4"

diff --git a/examples/HyperNet/Project.toml b/examples/HyperNet/Project.toml
@@ -1,8 +1,6 @@
 [deps]
 ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
 ComponentArrays = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 MLDatasets = "eb30cadb-4394-5ae3-aed4-317e484a6458"
@@ -18,7 +16,6 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 [compat]
 ADTypes = "1"
 ComponentArrays = "0.15"
-Literate = "2"
 Lux = "1"
 LuxCUDA = "0.3"
 MLDatasets = "0.7"

diff --git a/examples/NeuralODE/Project.toml b/examples/NeuralODE/Project.toml
@@ -1,7 +1,6 @@
 [deps]
 ComponentArrays = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66"
 InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 MLDatasets = "eb30cadb-4394-5ae3-aed4-317e484a6458"
@@ -17,7 +16,6 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [compat]
 ComponentArrays = "0.15"
-Literate = "2"
 Lux = "1"
 LuxCUDA = "0.2, 0.3"
 MLDatasets = "0.5, 0.7"

diff --git a/examples/OptimizationIntegration/Project.toml b/examples/OptimizationIntegration/Project.toml
@@ -1,9 +1,7 @@
 [deps]
 CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
 ComponentArrays = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 IterTools = "c8e1da08-722c-5040-9ed9-7db0dc04731e"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54"
@@ -18,9 +16,7 @@ SciMLSensitivity = "1ed8b502-d754-442c-8d5d-10ac956f44a1"
 [compat]
 CairoMakie = "0.12.10"
 ComponentArrays = "0.15.17"
-InteractiveUtils = "<0.0.1, 1"
 IterTools = "1.10"
-Literate = "2.19"
 Lux = "1"
 LuxCUDA = "0.3.3"
 MLUtils = "0.4.4"

diff --git a/examples/PINN2DPDE/Project.toml b/examples/PINN2DPDE/Project.toml
@@ -1,8 +1,6 @@
 [deps]
 ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
 CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54"
@@ -14,10 +12,8 @@ Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [compat]
-ADTypes = "1.7.1"
+ADTypes = "1.8.1"
 CairoMakie = "0.12.10"
-InteractiveUtils = "<0.0.1, 1"
-Literate = "2"
 Lux = "1"
 LuxCUDA = "0.3.3"
 MLUtils = "0.4.4"

diff --git a/examples/PolynomialFitting/Project.toml b/examples/PolynomialFitting/Project.toml
@@ -1,8 +1,6 @@
 [deps]
 ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
 CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 Optimisers = "3bd65402-5787-11e9-1adc-39752487f4e2"
@@ -14,7 +12,6 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 [compat]
 ADTypes = "1"
 CairoMakie = "0.12"
-Literate = "2"
 Lux = "1"
 LuxCUDA = "0.3"
 Optimisers = "0.3"

diff --git a/examples/SimpleChains/Project.toml b/examples/SimpleChains/Project.toml
@@ -1,7 +1,5 @@
 [deps]
 ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 MLDatasets = "eb30cadb-4394-5ae3-aed4-317e484a6458"
 MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54"
@@ -14,7 +12,6 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [compat]
 ADTypes = "1"
-Literate = "2"
 Lux = "1"
 MLDatasets = "0.7.14"
 MLUtils = "0.4"

diff --git a/examples/SimpleRNN/Project.toml b/examples/SimpleRNN/Project.toml
@@ -1,8 +1,6 @@
 [deps]
 ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
-Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306"
 Lux = "b2108857-7c20-44ae-9111-449ecde12c47"
 LuxCUDA = "d0bbae9a-e099-4d5b-a835-1c6931763bda"
 MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54"
@@ -14,8 +12,7 @@ Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [compat]
 ADTypes = "1"
-JLD2 = "0.4, 0.5"
-Literate = "2"
+JLD2 = "0.5"
 Lux = "1"
 LuxCUDA = "0.3"
 MLUtils = "0.4"