Reorder badges and add reference

readme.md

@@ -2,14 +2,14 @@
 
 ## Multimodal connectome processing with the `micapipe` ##
 [![version](https://img.shields.io/github/v/tag/MICA-MNI/micapipe)](https://github.com/MICA-MNI/micapipe)
+[![Docker Image Version](https://img.shields.io/docker/v/micalab/micapipe?color=blue&label=docker%20version)](https://hub.docker.com/r/micalab/micapipe)
+[![Docker Pulls](https://img.shields.io/docker/pulls/micalab/micapipe)](https://hub.docker.com/r/micalab/micapipe)
 [![License: GPL v3](https://img.shields.io/github/license/MICA-MNI/micapipe?color=blue)](https://www.gnu.org/licenses/gpl-3.0)
 [![Documentation Status](https://readthedocs.org/projects/micapipe/badge/?version=latest)](https://micapipe.readthedocs.io/en/latest/?badge=latest)
 [![CircleCI](https://circleci.com/gh/MICA-MNI/micapipe/tree/master.svg?style=shield)](https://circleci.com/gh/rcruces/MICA-MNI/tree/master)
 [![Codacy Badge](https://api.codacy.com/project/badge/Grade/7da8a9a3524745bc9616fd465a17f41b)](https://app.codacy.com/gh/rcruces/micapipe?utm_source=github.com&utm_medium=referral&utm_content=rcruces/micapipe&utm_campaign=Badge_Grade)
-[![GitHub stars](https://img.shields.io/github/stars/MICA-MNI/micapipe?color=brightgreen)](https://github.com/MICA-MNI/micapipe/stargazers)
 [![GitHub issues](https://img.shields.io/github/issues/MICA-MNI/micapipe)](https://github.com/MICA-MNI/micapipe/issues)
-[![Docker Pulls](https://img.shields.io/docker/pulls/micalab/micapipe)](https://hub.docker.com/r/micalab/micapipe)
-[![Docker Image Version](https://img.shields.io/docker/v/micalab/micapipe?color=blue&label=docker%20version)](https://hub.docker.com/r/micalab/micapipe)
+[![GitHub stars](https://img.shields.io/github/stars/MICA-MNI/micapipe?color=brightgreen)](https://github.com/MICA-MNI/micapipe/stargazers)
 
 [`micapipe`](micapipe.readthedocs.io) is developed by [MICA-lab](https://mica-mni.github.io) at McGill University for use at [the Neuro](https://www.mcgill.ca/neuro/), McConnell Brain Imaging Center ([BIC](https://www.mcgill.ca/bic/)).  
 > The main goal of this pipeline is to provide a semi-flexible and robust framework to process MRI images and generate ready to use modality based connectomes.    
@@ -24,6 +24,9 @@ You can find the documentation in [micapipe.readthedocs.io](http://micapipe.read
 ## Container ##
 You can find the latest version of the container in [Docker](https://hub.docker.com/r/micalab/micapipe/)
 
+## Reference ##
+> Raúl R. Cruces, Jessica Royer, Peer Herholz, Sara Larivière, Reinder Vos de Wael, Casey Paquola, Oualid Benkarim, Bo-yong Park, Janie Degré-Pelletier, Mark Nelson, Jordan DeKraker, Ilana Leppert, Christine Tardif, Jean-Baptiste Poline, Luis Concha, Boris C. Bernhardt. (2022). *Micapipe: a pipeline for multimodal neuroimaging and connectome analysis.* NeuroImage, 2022, 119612, ISSN 1053-8119. doi: https://doi.org/10.1016/j.neuroimage.2022.119612
+
 ## Workflow ##
 ![micapipe](img/workflow-outputs_black.png)