LTR7-up

This is an ensembl of codes used in the analysis performed for Carter et al. for the publication in eLife journal.

Name		Name	Last commit message	Last commit date
Latest commit History 12 Commits
7-up salmon indexing		7-up salmon indexing
Analyzing SMART-seq2 for LTR7 expression		Analyzing SMART-seq2 for LTR7 expression
ChIP-seq profiling over LTR7		ChIP-seq profiling over LTR7
Downstream of salmon run		Downstream of salmon run
Enrichment_LTR7_ChIP-seq_peaks		Enrichment_LTR7_ChIP-seq_peaks
LTR7 target genes		LTR7 target genes
README.md		README.md
Run salmon		Run salmon
plotting LTR7 subgroups		plotting LTR7 subgroups
preparation for ChIP-seq profiling over LTR7		preparation for ChIP-seq profiling over LTR7

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